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384
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Why Is My Uniquely Mapped Read Count Higher in Samtools Compared to Bowtie2?
Bowtie2
updated 4 months ago by 102k • written 4 months ago by ▴ 10
1
vote
2
replies
597
views
Problem in count Matrix from Featurecount
countMatrix Featurecount BAM
updated 6 months ago by 152k • written 7 months ago by ▴ 10
0
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0
replies
270
views
Intersect between bedGraph and bed file
count bedtools bedGraph Matrix
7 months ago by daffodil ▴ 10
4
votes
2
replies
621
views
Problem in calling peak by MACS3
MACS3
updated 7 months ago by 88k • written 7 months ago by ▴ 10
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0
replies
333
views
ucsc table browser
ucsc
8 months ago by daffodil ▴ 10
0
votes
0
replies
258
views
Pausin index for qpro-seq
pausing qpro-seq index
8 months ago by daffodil ▴ 10
0
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0
replies
489
views
Comment: Comment: Clarification on UMI Length in FASTQ File after Trimming with fastp
updated 8 months ago by 152k • written 8 months ago by ▴ 10
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2
replies
489
views
Clarification on UMI Length in FASTQ File after Trimming with fastp
umi adapter
updated 8 months ago by 152k • written 8 months ago by ▴ 10
0
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1
reply
936
views
Comment: Comment: Different result by bowtie2
8 months ago by daffodil ▴ 10
3
votes
4
replies
936
views
Different result by bowtie2
Bowtie2
updated 8 months ago by 152k • written 9 months ago by ▴ 10
0
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0
replies
268
views
The discrepancy between the bowtie2 alignment summary and the samtools flagstat
bowtie2 alignment summary
updated 10 months ago by 152k • written 10 months ago by ▴ 10
0
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0
replies
241
views
qPRO-Seq analysis
qpro
10 months ago by daffodil ▴ 10
0
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0
replies
363
views
Homer motif analysis
Homer
13 months ago by daffodil ▴ 10
1
vote
2
replies
1.1k
views
Error during demultiplexing by bcl2fastq
bcl2fastq
updated 14 months ago by 152k • written 14 months ago by ▴ 10
0
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1
reply
625
views
MACS3 or SEACR
MACS3 SEACR
updated 14 months ago by ★ 19k • written 14 months ago by ▴ 10
0
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0
replies
345
views
Motif analysis by HOMER
Homer
15 months ago by daffodil ▴ 10
0
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0
replies
1.5k
views
Comment: Comment: RNA_seq
updated 15 months ago by 152k • written 15 months ago by ▴ 10
0
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2
replies
1.5k
views
Comment: Comment: RNA_seq
updated 15 months ago by 45k • written 15 months ago by ▴ 10
0
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2
replies
1.5k
views
Comment: Comment: RNA_seq
15 months ago by daffodil ▴ 10
0
votes
9
replies
1.5k
views
RNA_seq
RNA-seq
updated 15 months ago by 15k • written 15 months ago by ▴ 10
0
votes
1
reply
786
views
Comment: Comment: Spearman correlation for ATAC data
15 months ago by daffodil ▴ 10
2
votes
3
replies
786
views
Spearman correlation for ATAC data
correlation Spearman
updated 15 months ago by ▴ 220 • written 15 months ago by ▴ 10
1
vote
2
replies
792
views
Normalization of Bigwig file
ATAC BigWig
updated 16 months ago by 45k • written 16 months ago by ▴ 10
0
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0
replies
2.3k
views
Comment: Comment: Bowtie alignment
16 months ago by daffodil ▴ 10
0
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1
reply
2.3k
views
Comment: Comment: Bowtie alignment
updated 16 months ago by 152k • written 16 months ago by ▴ 10
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1
reply
2.3k
views
Comment: Comment: Bowtie alignment
16 months ago by daffodil ▴ 10
0
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0
replies
2.3k
views
Comment: Comment: Bowtie alignment
16 months ago by daffodil ▴ 10
1
vote
14
replies
2.3k
views
Bowtie alignment
Bowtie2 singletons
16 months ago by daffodil ▴ 10
0
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2
replies
2.3k
views
Comment: Comment: Bowtie alingment
16 months ago by daffodil ▴ 10
0
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0
replies
2.3k
views
Comment: Comment: Bowtie alingment
16 months ago by daffodil ▴ 10
0
votes
1
reply
1.5k
views
Comment: Comment: Adapter Removing
16 months ago by daffodil ▴ 10
0
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0
replies
1.5k
views
Comment: Comment: Adapter Removing
16 months ago by daffodil ▴ 10
3
votes
8
replies
1.5k
views
Adapter Removing
FastQC
updated 16 months ago by ▴ 360 • written 16 months ago by ▴ 10
0
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1
reply
1.5k
views
Comment: Comment: Adapter Removing
16 months ago by daffodil ▴ 10
0
votes
1
reply
1.5k
views
Comment: Comment: Adapter Removing
16 months ago by daffodil ▴ 10
1
vote
1
reply
482
views
Markduplicated picard
picard
updated 16 months ago by 152k • written 16 months ago by ▴ 10
0
votes
0
replies
584
views
Comment: Comment: bcl2fastq
16 months ago by daffodil ▴ 10
0
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0
replies
1.2k
views
Comment: Comment: Generate BED file
16 months ago by daffodil ▴ 10
0
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1
reply
1.2k
views
Comment: Comment: Generate BED file
16 months ago by daffodil ▴ 10
5
votes
5
replies
1.2k
views
Generate BED file
bed
16 months ago by daffodil ▴ 10
1
vote
2
replies
584
views
bcl2fastq
bcl2fstq
16 months ago by daffodil ▴ 10
0
votes
0
replies
319
views
genomation
R genomation
updated 16 months ago by 45k • written 16 months ago by ▴ 10
0
votes
0
replies
580
views
BigWig file Normalization
Bigwig file
17 months ago by daffodil ▴ 10
0
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0
replies
2.7k
views
Comment: Comment: BedGraph file
17 months ago by daffodil ▴ 10
0
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0
replies
2.7k
views
Comment: Comment: BedGraph file
17 months ago by daffodil ▴ 10
0
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1
reply
2.7k
views
Comment: Comment: BedGraph file
17 months ago by daffodil ▴ 10
0
votes
2
replies
2.7k
views
Comment: Comment: BedGraph file
updated 17 months ago by 152k • written 17 months ago by ▴ 10
0
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2
replies
2.7k
views
Comment: Comment: BedGraph file
updated 17 months ago by 152k • written 17 months ago by ▴ 10
0
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1
reply
2.7k
views
Comment: Comment: BedGraph file
updated 17 months ago by 152k • written 17 months ago by ▴ 10
4
votes
2
replies
1.2k
views
BigWig file in IGV
IGV
updated 17 months ago by 45k • written 17 months ago by ▴ 10
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