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3
votes
4
replies
690
views
genome assembly records not present in assembly_summary.txt
ncbi bacteria assembly
written 7 months ago by ▴ 10
0
votes
0
replies
540
views
Comment: Comment: assemble extracted kmers into longer contigs/sequences
5 months ago by sapuizait ▴ 10
0
votes
1
reply
540
views
Comment: Comment: assemble extracted kmers into longer contigs/sequences
5 months ago by sapuizait ▴ 10
0
votes
1
reply
540
views
Comment: Comment: assemble extracted kmers into longer contigs/sequences
5 months ago by sapuizait ▴ 10
3
votes
5
replies
540
views
assemble extracted kmers into longer contigs/sequences
assembly unique kmers
5 months ago by sapuizait ▴ 10
0
votes
0
replies
690
views
Comment: Comment: genome assembly records not present in assembly_summary.txt
7 months ago by sapuizait ▴ 10
0
votes
0
replies
2.1k
views
Comment: Comment: calculate nucleotide diversity from whole-genome-sequence data for individual ge
9 months ago by sapuizait ▴ 10
0
votes
0
replies
571
views
Comment: Comment: many taxa and many seqs phylogeny
10 months ago by sapuizait ▴ 10
2
votes
2
replies
571
views
many taxa and many seqs phylogeny
raxML fasttree phylogeny
10 months ago by sapuizait ▴ 10
5
votes
1
reply
560
views
samtools extract the non-specified region
samtools
updated 11 months ago by 44k • written 11 months ago by ▴ 10
0
votes
0
replies
1.4k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
14 months ago by sapuizait ▴ 10
0
votes
0
replies
1.4k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
14 months ago by sapuizait ▴ 10
0
votes
1
reply
1.4k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
14 months ago by sapuizait ▴ 10
0
votes
1
reply
1.4k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
updated 14 months ago by 44k • written 14 months ago by ▴ 10
0
votes
0
replies
1.4k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
14 months ago by sapuizait ▴ 10
1
vote
9
replies
1.4k
views
more reads in metagenomic samples after 'removing host reads'
bowtie2 samtools
updated 14 months ago by 147k • written 14 months ago by ▴ 10
0
votes
1
reply
923
views
Comment: Comment: database for better classification of illumina contigs
21 months ago by sapuizait ▴ 10
1
vote
3
replies
923
views
database for better classification of illumina contigs
classification illumina contigs NR
updated 21 months ago by ★ 1.4k • written 22 months ago by ▴ 10
0
votes
0
replies
1.1k
views
Comment: Comment: why merge assemblies?
3.0 years ago by sapuizait ▴ 10
2
votes
3
replies
1.1k
views
why merge assemblies?
assembly merge illumuna data
3.0 years ago by sapuizait ▴ 10
0
votes
0
replies
2.7k
views
Comment: Comment: kegg IDs to pathways in R
3.1 years ago by sapuizait ▴ 10
0
votes
0
replies
2.7k
views
Comment: Comment: kegg IDs to pathways in R
3.1 years ago by sapuizait ▴ 10
2
votes
4
replies
2.7k
views
kegg IDs to pathways in R
R KEGG list pathways
3.1 years ago by sapuizait ▴ 10
0
votes
0
replies
1.3k
views
Comment: Comment: convert detailed alignment format to fasta
3.3 years ago by sapuizait ▴ 10
0
votes
1
reply
1.3k
views
Comment: Comment: convert detailed alignment format to fasta
updated 3.3 years ago by 164k • written 3.3 years ago by ▴ 10
1
vote
4
replies
1.3k
views
convert detailed alignment format to fasta
alignment
updated 16 months ago by 44k • written 3.3 years ago by ▴ 10
0
votes
1
reply
608
views
inexpensive method to detect SNPs in entire bacterial genomes
bacteria SNPs RFLP genome
updated 3.4 years ago by ★ 28k • written 3.4 years ago by ▴ 10
0
votes
0
replies
525
views
need advice for comparing fragment counts of genes across multiple WGS metagenomes
WGS normalization KMA
3.7 years ago by sapuizait ▴ 10
0
votes
0
replies
2.2k
views
Comment: C: cannot download refseq genomes
3.8 years ago by sapuizait ▴ 10
0
votes
0
replies
2.2k
views
Comment: C: cannot download refseq genomes
3.8 years ago by sapuizait ▴ 10
4
votes
6
replies
2.2k
views
cannot download refseq genomes
refseq
updated 20 months ago by 44k • written 3.8 years ago by ▴ 10
0
votes
1
reply
2.2k
views
Comment: C: cannot download refseq genomes
3.8 years ago by sapuizait ▴ 10
3
votes
7
replies
1.4k
views
Has anyone heard the term data warehousing in genomics before?
data warehouse
updated 3.8 years ago by • 0 • written 6.0 years ago by ▴ 10
0
votes
0
replies
751
views
recover IMG ids from JGI site
JGI IMG ids
updated 3.8 years ago by 15k • written 3.8 years ago by ▴ 10
0
votes
0
replies
3.8k
views
Comment: A: How/Where do I find mapped GO terms in EggNOG (preferably via FTP download)?
updated 4.3 years ago by 12k • written 4.9 years ago by ▴ 10
0
votes
0
replies
10k
views
Answer: Answer: RNASeq user experience with Novogene?
updated 24 months ago by 44k • written 4.4 years ago by ▴ 10
0
votes
0
replies
10k
views
Comment: C: RNASeq user experience with Novogene?
4.4 years ago by sapuizait ▴ 10
0
votes
0
replies
721
views
diamond (blast) exit codes
diamond exit codes
4.7 years ago by sapuizait ▴ 10
0
votes
0
replies
6.2k
views
Comment: A: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
4.8 years ago by sapuizait ▴ 10
0
votes
0
replies
1.4k
views
Answer: A: Has anyone heard the term data warehousing in genomics before?
6.0 years ago by sapuizait ▴ 10
0
votes
1
reply
1.4k
views
Comment: C: Has anyone heard the term data warehousing in genomics before?
6.0 years ago by sapuizait ▴ 10
41 results • Page 1 of 1
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