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Question about ENCODE ATAC-seq bed file, bed narrowPeak vs bed idr_ranked_peak
ATAC-seq
3.7 years ago by yanweng ▴ 80
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1
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3.5k
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Comment: C: TFBS enrichiment analysis
4.7 years ago by yanweng ▴ 80
2
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8
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1.6k
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Identify TF binding motif for a given gene
RNA-Seq ChIP-Seq genome sequencing gene
4.7 years ago by yanweng ▴ 80
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1.6k
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Comment: C: Identify motif for a given gene
4.7 years ago by yanweng ▴ 80
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1
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1.6k
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Comment: C: Identify motif for a given gene
4.7 years ago by yanweng ▴ 80
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1
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1.6k
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Comment: C: Identify motif for a given gene
4.7 years ago by yanweng ▴ 80
3
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1
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3.0k
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Answer: A: Homer software -size parameter
4.8 years ago by yanweng ▴ 80
5
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2
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3.0k
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Homer software -size parameter
ChIP-Seq sequencing gene ATAC-seq
4.8 years ago by yanweng ▴ 80
4
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4
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3.1k
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Paired-end RNA sequence - which read is complimentary?
RNA-Seq next-gen sequence gene
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 80
1
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4
replies
2.5k
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Samtools 1.3 mpileup result < >
RNA-Seq sequencing next-gen samtools pileup
updated 6.2 years ago by 44k • written 8.8 years ago by ▴ 80
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1
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2.5k
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Answer: A: Samtools 1.3 mpileup result < >
updated 6.2 years ago by 44k • written 8.8 years ago by ▴ 80
1
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0
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1.7k
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Use PacBio's iso-seq data to look for variant
SNP sequencing next-gen
updated 6.3 years ago by 20 • written 8.5 years ago by ▴ 80
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4.6k
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Comment: C: In RNA-seq data, how to find whether the mRNA is on the forward strand or revers
8.6 years ago by yanweng ▴ 80
0
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1
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4.6k
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Comment: C: In RNA-seq data, how to find whether the mRNA is on the forward strand or revers
8.6 years ago by yanweng ▴ 80
5
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8
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4.6k
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In RNA-seq data, how to find whether the mRNA is on the forward strand or reverse strand?
RNA-Seq rna-seq genome next-gen alignment
updated 8.6 years ago by 104k • written 8.6 years ago by ▴ 80
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4.6k
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Comment: C: In RNA-seq data, how to find whether the mRNA is on the forward strand or revers
8.6 years ago by yanweng ▴ 80
0
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0
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1.4k
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Score column of GeneMarkS
Assembly genome gene sequence
updated 20 months ago by 44k • written 8.6 years ago by ▴ 80
0
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2.5k
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Comment: C: Samtools 1.3 mpileup result < >
8.8 years ago by yanweng ▴ 80
0
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0
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2.5k
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Comment: C: Samtools 1.3 mpileup result < >
8.8 years ago by yanweng ▴ 80
0
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0
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3.1k
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Comment: Comment: Paired-end RNA sequence - which read is complimentary?
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 80
7
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4
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5.4k
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How does a read, which is complementary to the reference genome, map to the reference?
RNA-Seq genome next-gen-sequencing alignment
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 80
0
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1
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5.4k
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Comment: Comment: How does a read, which is complementary to the reference genome, map to the refe
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 80
0
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1
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5.4k
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Comment: Comment: How does a read, which is complementary to the reference genome, map to the refe
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 80
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