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Question about ENCODE ATAC-seq bed file, bed narrowPeak vs bed idr_ranked_peak
ATAC-seq
4.2 years ago by yanweng ▴ 80
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1
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3.8k
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Comment: C: TFBS enrichiment analysis
5.1 years ago by yanweng ▴ 80
2
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8
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1.7k
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Identify TF binding motif for a given gene
RNA-Seq ChIP-Seq genome sequencing gene
5.1 years ago by yanweng ▴ 80
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0
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1.7k
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Comment: C: Identify motif for a given gene
5.1 years ago by yanweng ▴ 80
0
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1
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1.7k
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Comment: C: Identify motif for a given gene
5.1 years ago by yanweng ▴ 80
0
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1
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1.7k
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Comment: C: Identify motif for a given gene
5.1 years ago by yanweng ▴ 80
5
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2
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3.4k
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Homer software -size parameter
ChIP-Seq sequencing gene ATAC-seq
5.2 years ago by yanweng ▴ 80
3
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1
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3.4k
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Answer: A: Homer software -size parameter
5.2 years ago by yanweng ▴ 80
4
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4
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3.4k
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Paired-end RNA sequence - which read is complimentary?
RNA-Seq next-gen sequence gene
updated 2.8 years ago by 45k • written 9.2 years ago by ▴ 80
1
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4
replies
2.7k
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Samtools 1.3 mpileup result < >
RNA-Seq sequencing next-gen samtools pileup
updated 6.6 years ago by 45k • written 9.2 years ago by ▴ 80
0
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1
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2.7k
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Answer: A: Samtools 1.3 mpileup result < >
updated 6.6 years ago by 45k • written 9.2 years ago by ▴ 80
1
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0
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1.7k
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Use PacBio's iso-seq data to look for variant
SNP sequencing next-gen
updated 6.7 years ago by 20 • written 8.9 years ago by ▴ 80
0
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0
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4.9k
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Comment: C: In RNA-seq data, how to find whether the mRNA is on the forward strand or revers
9.0 years ago by yanweng ▴ 80
0
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1
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4.9k
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Comment: C: In RNA-seq data, how to find whether the mRNA is on the forward strand or revers
9.0 years ago by yanweng ▴ 80
5
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8
replies
4.9k
views
In RNA-seq data, how to find whether the mRNA is on the forward strand or reverse strand?
RNA-Seq rna-seq genome next-gen alignment
updated 9.0 years ago by 105k • written 9.0 years ago by ▴ 80
0
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0
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4.9k
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Comment: C: In RNA-seq data, how to find whether the mRNA is on the forward strand or revers
9.0 years ago by yanweng ▴ 80
0
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0
replies
1.5k
views
Score column of GeneMarkS
Assembly genome gene sequence
updated 2.1 years ago by 45k • written 9.0 years ago by ▴ 80
0
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0
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2.7k
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Comment: C: Samtools 1.3 mpileup result < >
9.2 years ago by yanweng ▴ 80
0
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0
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2.7k
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Comment: C: Samtools 1.3 mpileup result < >
9.2 years ago by yanweng ▴ 80
0
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0
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3.4k
views
Comment: Comment: Paired-end RNA sequence - which read is complimentary?
updated 2.8 years ago by 45k • written 9.2 years ago by ▴ 80
7
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4
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5.8k
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How does a read, which is complementary to the reference genome, map to the reference?
RNA-Seq genome next-gen-sequencing alignment
updated 2.8 years ago by 45k • written 9.2 years ago by ▴ 80
0
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1
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5.8k
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Comment: Comment: How does a read, which is complementary to the reference genome, map to the refe
updated 2.8 years ago by 45k • written 9.2 years ago by ▴ 80
0
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1
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5.8k
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Comment: Comment: How does a read, which is complementary to the reference genome, map to the refe
updated 2.8 years ago by 45k • written 9.2 years ago by ▴ 80
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