Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
4
replies
432
views
How to rank genes for GSEA using edgeR-LRT results ?
DEG edgeR
updated 9 days ago by 15k • written 11 days ago by ▴ 660
0
votes
0
replies
437
views
Comment: Comment: Indica rice genome and annotation files
22 days ago by Picasa ▴ 660
0
votes
0
replies
244
views
Comment: Comment: DEseq2: Advice for model (double interaction ?)
4 weeks ago by Picasa ▴ 660
1
vote
2
replies
244
views
DEseq2: Advice for model (double interaction ?)
deseq2 matrix dge
4 weeks ago by Picasa ▴ 660
0
votes
0
replies
422
views
Comment: Comment: How to visualize shared pathways between ORA (enrichment) results?
3 months ago by Picasa ▴ 660
1
vote
2
replies
422
views
How to visualize shared pathways between ORA (enrichment) results?
visualization ora pathways enrichment
3 months ago by Picasa ▴ 660
0
votes
1
reply
984
views
Comment: Comment: How to handle duplicate genes in DoHeatmap() for top DEGs across clusters (seura
4 months ago by Picasa ▴ 660
0
votes
1
reply
984
views
Comment: Comment: How to handle duplicate genes in DoHeatmap() for top DEGs across clusters (seura
4 months ago by Picasa ▴ 660
0
votes
0
replies
984
views
Comment: Comment: How to handle duplicate genes in DoHeatmap() for top DEGs across clusters (seura
4 months ago by Picasa ▴ 660
0
votes
7
replies
984
views
How to handle duplicate genes in DoHeatmap() for top DEGs across clusters (seurat single cell)
seurat
updated 4 months ago by 6.2k • written 4 months ago by ▴ 660
0
votes
0
replies
440
views
Comment: Comment: Get SYMBOL using mapIds with T2T genome ?
8 months ago by Picasa ▴ 660
0
votes
2
replies
440
views
Get SYMBOL using mapIds with T2T genome ?
t2t
8 months ago by Picasa ▴ 660
0
votes
1
reply
1.5k
views
Comment: Comment: Use limma for correlation analysis of RNA-seqdata and continous trait
9 months ago by Picasa ▴ 660
0
votes
1
reply
1.6k
views
Answer: Answer: Speed up Seurat FindClusters execution?
9 months ago by Picasa ▴ 660
0
votes
1
reply
611
views
How to compute gsea overlap of gene set with R
gsea overlap
updated 10 months ago by ▴ 100 • written 10 months ago by ▴ 660
1
vote
0
replies
5.9k
views
Comment: Comment: What is the best practice of scRNA workflow for multiple patients and samples us
10 months ago by Picasa ▴ 660
0
votes
1
reply
2.2k
views
Comment: Comment: Harmony integration group.by.var parameter
10 months ago by Picasa ▴ 660
0
votes
1
reply
12k
views
Comment: Comment: Merging multiple samples in Seurat
10 months ago by Picasa ▴ 660
0
votes
0
replies
2.2k
views
Comment: Comment: Harmony integration group.by.var parameter
10 months ago by Picasa ▴ 660
0
votes
1
reply
2.2k
views
Comment: Comment: Harmony integration group.by.var parameter
10 months ago by Picasa ▴ 660
2
votes
6
replies
2.2k
views
Harmony integration group.by.var parameter
single-cell harmony
updated 10 months ago by ★ 18k • written 10 months ago by ▴ 660
0
votes
1
reply
425
views
Normalization strategies for comparing mapped reads across samples in RNA-seq
normalization rnaseq
updated 12 months ago by 45k • written 12 months ago by ▴ 660
1
vote
1
reply
433
views
Seeking for edgeR TMM Normalization calcul example
tmm edgeR deseq2
updated 12 months ago by ★ 18k • written 12 months ago by ▴ 660
0
votes
0
replies
2.1k
views
Comment: Comment: Filter out doublet and Clustering
13 months ago by Picasa ▴ 660
0
votes
1
reply
705
views
Comment: Comment: GO enrichment plot with dotplot strange axis
14 months ago by Picasa ▴ 660
0
votes
3
replies
705
views
GO enrichment plot with dotplot strange axis
enrichment go plot
updated 14 months ago by ★ 3.0k • written 14 months ago by ▴ 660
0
votes
0
replies
54k
views
Comment: Comment: ClusterProfiler : What is GeneRatio and BgRatio?
14 months ago by Picasa ▴ 660
0
votes
1
reply
667
views
Seurat: How to get all genes name of a cell ?
seurat
updated 22 months ago by ★ 1.8k • written 22 months ago by ▴ 660
0
votes
0
replies
11k
views
Comment: Comment: DESeq2 modelling and Wald's test
22 months ago by Picasa ▴ 660
0
votes
1
reply
847
views
DESeq2 : parameter of Negative Binomial model in a context of gene expression
rnaseq DESeq2 NB
22 months ago by Picasa ▴ 660
2
votes
11
replies
7.0k
views
7 follow
PCA on VCF
pca vcf
updated 2.7 years ago by 23k • written 9.0 years ago by ▴ 660
0
votes
6
replies
4.8k
views
Merging vcf files ?
vcf
updated 2.8 years ago by • 0 • written 8.8 years ago by ▴ 660
0
votes
1
reply
1.1k
views
Comment: Comment: Alignment of genomes and get statistics about alignment
3.5 years ago by Picasa ▴ 660
0
votes
3
replies
1.1k
views
Alignment of genomes and get statistics about alignment
genome
updated 3.5 years ago by ▴ 550 • written 3.5 years ago by ▴ 660
2
votes
2
replies
1.0k
views
Primers and multimapping ?
primer3
updated 3.5 years ago by 87k • written 3.5 years ago by ▴ 660
2
votes
1
reply
1.0k
views
R package for structural variation representation ?
structural variation mummer
updated 3.6 years ago by 4.1k • written 3.6 years ago by ▴ 660
0
votes
0
replies
5.9k
views
Comment: Comment: repeatmasker species setting
3.6 years ago by Picasa ▴ 660
0
votes
1
reply
8.6k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.7 years ago by Picasa ▴ 660
0
votes
1
reply
8.6k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.8 years ago by Picasa ▴ 660
0
votes
1
reply
8.6k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.8 years ago by Picasa ▴ 660
0
votes
1
reply
8.6k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.8 years ago by Picasa ▴ 660
0
votes
1
reply
8.6k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.8 years ago by Picasa ▴ 660
2
votes
7
replies
3.7k
views
Using RNA seq for genome annotation
maker annotation
updated 3.8 years ago by 102k • written 7.8 years ago by ▴ 660
0
votes
0
replies
654
views
Phased SNPs with single rad seq data ?
snp rad single
3.9 years ago by Picasa ▴ 660
0
votes
0
replies
814
views
Alternative free software for recombination rate estimation ?
radseq joinmap stacks
3.9 years ago by Picasa ▴ 660
0
votes
0
replies
1.2k
views
Tools for .hic file visualization
juicer 3d-dna hic
4.1 years ago by Picasa ▴ 660
0
votes
1
reply
4.5k
views
Comment: C: Using HiCanu assembler on PacBio Hifi reads
4.3 years ago by Picasa ▴ 660
0
votes
1
reply
955
views
Assessing collapsed assembly ?
Assembly paralogue collapsing
updated 4.8 years ago by 7.3k • written 4.8 years ago by ▴ 660
0
votes
1
reply
12k
views
Comment: C: Create de novo repeat library
4.8 years ago by Picasa ▴ 660
0
votes
1
reply
12k
views
Comment: C: Create de novo repeat library
4.8 years ago by Picasa ▴ 660
347 results • Page 1 of 7
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6