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replies
1.3k
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Mappability - Peak Seq (Convert chr1.fa to chr1b.out)
PeakSeq
MAPPABILITY
RNA-Seq
ChIP-Seq
8.3 years ago by
startup_biostar
▴ 20
3
votes
1
reply
6.3k
views
Splitting bed file chromosome wise into a text file with chromosome name
bedtools
bed
split
updated 8.3 years ago by
Alex Reynolds
36k • written 8.3 years ago by
startup_biostar
▴ 20
2
votes
1
reply
2.7k
views
samtools version 0.1.19 to samtools version 1.2 (Samtools view conversion)
samtools
ChIP-Seq
RNA-Seq
updated 8.3 years ago by
Devon Ryan
104k • written 8.3 years ago by
startup_biostar
▴ 20
0
votes
0
replies
2.0k
views
DNASE2TF + HOMER
DNASE
RNA-Seq
ChIP-Seq
HOMER
updated 8.3 years ago by
Satyajeet Khare
★ 1.6k • written 8.3 years ago by
startup_biostar
▴ 20
0
votes
1
reply
42k
views
Comment:
C: Merging/Concatenating Vcf Files
8.4 years ago by
startup_biostar
▴ 20
0
votes
1
reply
1.9k
views
Accessing the information available in the GEO database [Programmatic access for GEO database]
RNA-Seq
ChIP-Seq
GEO
Entrez
updated 8.5 years ago by
natasha.sernova
★ 4.0k • written 8.5 years ago by
startup_biostar
▴ 20
0
votes
1
reply
1.4k
views
Retrieving Cell names of an experiment using NCBI - Eutil API
RNA-Seq
NCBI
Eutils
Cell Type
updated 8.5 years ago by
ATRX
★ 1.1k • written 8.5 years ago by
startup_biostar
▴ 20
4
votes
2
replies
3.9k
views
Identifying Exons and number of reads between exons from a BAM file
RNA-Seq
ChIP-Seq
BAM
EXONS
updated 8.5 years ago by
Alex Reynolds
36k • written 8.5 years ago by
startup_biostar
▴ 20
2
votes
1
reply
1.8k
views
Rsamtool or Rbamtools function to view the number of reads between a range
RNA-Seq
Rsamtools
rbamtools
R
updated 8.6 years ago by
Devon Ryan
104k • written 8.6 years ago by
startup_biostar
▴ 20
2
votes
1
reply
1.9k
views
Retrieving overlaps inside a single dataset using foverlaps
foverlaps
RNA-Seq
updated 8.6 years ago by
Amirosein
▴ 70 • written 8.6 years ago by
startup_biostar
▴ 20
3
votes
1
reply
1.9k
views
Comparing methylation data - Data cleaning and efficient code question
genome
sequencing
R
8.7 years ago by
startup_biostar
▴ 20
0
votes
0
replies
2.8k
views
Comment:
C: How to compare methylation array data with methylation MeDip-seq data?
8.7 years ago by
startup_biostar
▴ 20
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