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Comment: C: How to increase the speed of miRanda target prediction program?
7.0 years ago by Nicolas Rosewick 11k
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1
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2.2k
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Comment: C: Trim read-specific adapter in paired-end reads
7.0 years ago by Nicolas Rosewick 11k
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1
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2.2k
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Comment: C: Trim read-specific adapter in paired-end reads
7.0 years ago by Nicolas Rosewick 11k
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0
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2.2k
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Comment: C: Trim read-specific adapter in paired-end reads
7.0 years ago by Nicolas Rosewick 11k
1
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7
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2.2k
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Trim read-specific adapter in paired-end reads
adapter trim
7.0 years ago by Nicolas Rosewick 11k
3
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0
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4.2k
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Answer: A: Identifying long stretches of Ns
7.0 years ago by Nicolas Rosewick 11k
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1
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2.3k
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Comment: C: DGE on protein-coding and lncRNAs separately?
7.0 years ago by Nicolas Rosewick 11k
1
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1
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2.3k
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Answer: A: DGE on protein-coding and lncRNAs separately?
7.0 years ago by Nicolas Rosewick 11k
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1.4k
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Comment: A: Obtain fragments from RNA-Seq reads?
7.0 years ago by Nicolas Rosewick 11k
2
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0
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40k
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Comment: C: PCA in a RNA seq analysis
7.0 years ago by Nicolas Rosewick 11k
4
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2
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2.0k
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Answer: C: STAR analysis and alignment
7.0 years ago by Nicolas Rosewick 11k
5
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3
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6.6k
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Answer: A: STAR for bacterial genome
7.0 years ago by Nicolas Rosewick 11k
1
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0
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6.6k
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Comment: C: STAR for bacterial genome
7.0 years ago by Nicolas Rosewick 11k
2
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0
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13k
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Comment: C: Reporting p.value for my PCA results
7.0 years ago by Nicolas Rosewick 11k
0
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0
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1.3k
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Answer: A: next-gen sequencing analysis
7.0 years ago by Nicolas Rosewick 11k
10
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2
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13k
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Answer: A: Reporting p.value for my PCA results
7.0 years ago by Nicolas Rosewick 11k
1
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0
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13k
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Comment: C: Reporting p.value for my PCA results
7.0 years ago by Nicolas Rosewick 11k
1
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2
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3.6k
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UMI-tools: reads with different sizes in the same UMI group
UMI-tools group reads
7.0 years ago by Nicolas Rosewick 11k
1
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0
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3.6k
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Answer: A: UMI-tools: reads with different sizes in the same UMI group
7.0 years ago by Nicolas Rosewick 11k
4
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1
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13k
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Comment: C: Reporting p.value for my PCA results
7.0 years ago by Nicolas Rosewick 11k
1
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1
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3.4k
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Comment: C: Different coverage on RNA-Seq strands
7.0 years ago by Nicolas Rosewick 11k
1
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0
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1.6k
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Answer: A: Kallisto rna seq tool
7.0 years ago by Nicolas Rosewick 11k
0
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0
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3.0k
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Answer: A: p-value and FDR
7.0 years ago by Nicolas Rosewick 11k
3
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1.6k
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Comment: C: Why would be de novo gene assembly from RNA-seq data useful?
7.0 years ago by Nicolas Rosewick 11k
2
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5
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4.0k
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Cuffmerge : Why It Didn'T Merge These Transcripts Into One ?
cuffmerge transcript
updated 7.0 years ago by 20 • written 11.5 years ago by 11k
1
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1
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2.5k
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bowtie2 : different MAPQ if -k is set
bowtie2 mapq
updated 7.0 years ago by 35k • written 7.0 years ago by 11k
0
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1
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6.8k
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Comment: C: Differential gene expression based on "exon" or "CDS"?
7.1 years ago by Nicolas Rosewick 11k
1
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1
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1.8k
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Answer: A: tophat equal length problem
7.1 years ago by Nicolas Rosewick 11k
1
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0
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1.1k
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Comment: C: Reading splice daa
7.1 years ago by Nicolas Rosewick 11k
4
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1
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1.3k
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Forum: Best way to manage lots of omics data
database NGS
updated 17 months ago by 44k • written 7.1 years ago by 11k
1
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1
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18k
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Comment: C: STAR align multiple files
7.1 years ago by Nicolas Rosewick 11k
2
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0
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10k
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Answer: A: FDR and Pvalue in EdgeR
7.1 years ago by Nicolas Rosewick 11k
3
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0
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2.2k
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Comment: C: Quantification of a gene that is not in the reference genome
7.1 years ago by Nicolas Rosewick 11k
0
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0
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2.2k
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Comment: C: Quantification of a gene that is not in the reference genome
7.1 years ago by Nicolas Rosewick 11k
0
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2
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2.2k
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Comment: C: Quantification of a gene that is not in the reference genome
7.1 years ago by Nicolas Rosewick 11k
1
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0
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2.5k
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Comment: C: R: How to test for trend of risk scores
7.1 years ago by Nicolas Rosewick 11k
3
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1
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2.9k
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Comment: C: No ensemble ID for gene ID
7.2 years ago by Nicolas Rosewick 11k
1
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1
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2.5k
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Comment: C: Differential expressed genes in DESeq
7.2 years ago by Nicolas Rosewick 11k
0
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1
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2.5k
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Comment: C: Differential expressed genes in DESeq
7.2 years ago by Nicolas Rosewick 11k
1
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0
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16k
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Comment: C: how to combine multiple fasta file into a larger fasta file
7.2 years ago by Nicolas Rosewick 11k
2
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1
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3.5k
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Answer: A: Is this RNA-seq data reliable?
7.2 years ago by Nicolas Rosewick 11k
0
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0
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2.6k
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Answer: A: Is it fair to compare the significance of overlap of 2 different sized gene sets
7.2 years ago by Nicolas Rosewick 11k
0
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0
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3.7k
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Comment: C: Is PICARD CollectInsertSizeMetrics use soft-clipping information to compute the
7.2 years ago by Nicolas Rosewick 11k
4
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2
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3.7k
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Is PICARD CollectInsertSizeMetrics use soft-clipping information to compute the insert size ?
picard insert size soft-clipping
updated 7.2 years ago by 164k • written 7.2 years ago by 11k
1
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0
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2.7k
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Answer: A: Construction of network diagrams by using R
7.3 years ago by Nicolas Rosewick 11k
0
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0
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3.2k
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Comment: C: Kallisto : Compare TPM between samples from different illumina sequencers (HiSeq
7.3 years ago by Nicolas Rosewick 11k
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2
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3.2k
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Comment: C: Kallisto : Compare TPM between samples from different illumina sequencers (HiSeq
7.3 years ago by Nicolas Rosewick 11k
4
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4
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3.2k
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Kallisto : Compare TPM between samples from different illumina sequencers (HiSeq2000 and NextSeq500)
kallisto TPM
updated 7.3 years ago by 6.6k • written 7.3 years ago by 11k
3
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0
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2.8k
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Answer: A: Combining viral and host GTF files
7.3 years ago by Nicolas Rosewick 11k
0
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1
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3.5k
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Comment: C: Use kallisto with ONT (nanopore) cDNA long reads
7.3 years ago by Nicolas Rosewick 11k
1,080 results • Page 10 of 22
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