Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
1
reply
4.6k
views
Answer: A: How to calculate q value in rna-seq data?
8.2 years ago by Nicolas Rosewick 11k
2
votes
2
replies
4.2k
views
Tophat Parameters Misunderstanding
tophat
updated 8.2 years ago by 20 • written 12.6 years ago by 11k
11
votes
3
replies
12k
views
featureCounts exon counting problem
exon featurecounts
updated 3.6 years ago by 44k • written 9.3 years ago by 11k
0
votes
0
replies
1.2k
views
Comment: C: Getting a list of genes expressed
8.3 years ago by Nicolas Rosewick 11k
0
votes
0
replies
2.4k
views
Comment: C: Model scripts for R bioinformatics research
8.3 years ago by Nicolas Rosewick 11k
0
votes
1
reply
6.1k
views
Comment: C: Heatmap vs Volcano Plot
8.3 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.4k
views
How to check the expression of a specific gene across all TCGA samples
TCGA gene expression
updated 8.3 years ago by ★ 1.9k • written 8.3 years ago by 11k
9
votes
0
replies
9.7k
views
Answer: A: Any materials explaining BWA and Bowtie algorithm?
8.3 years ago by Nicolas Rosewick 11k
2
votes
5
replies
2.1k
views
What is the genic size (exon+intron) of a genome
gene genome
updated 8.3 years ago by ★ 3.2k • written 8.3 years ago by 11k
1
vote
2
replies
3.9k
views
Comment: C: An easy way to find appropriated tools : OMIC-tools
8.3 years ago by Nicolas Rosewick 11k
5
votes
1
reply
4.6k
views
Answer: A: How to get nucleotide sequences for a given list of genomic positions.
8.4 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.3k
views
Comment: C: Is cor() enough to tell about relations between genes?
8.4 years ago by Nicolas Rosewick 11k
2
votes
2
replies
2.3k
views
Comment: C: Is cor() enough to tell about relations between genes?
8.4 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.3k
views
Comment: C: Is cor() enough to tell about relations between genes?
8.4 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.3k
views
Comment: C: Is cor() enough to tell about relations between genes?
8.4 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.4k
views
Comment: C: filtering the rows in R
8.4 years ago by Nicolas Rosewick 11k
0
votes
1
reply
7.7k
views
Comment: C: R stat heatmap problem
8.4 years ago by Nicolas Rosewick 11k
0
votes
0
replies
25k
views
Comment: C: Volcano plot p-value or FDR?
8.5 years ago by Nicolas Rosewick 11k
0
votes
0
replies
3.4k
views
Gviz : fill and line arrow color issues
gviz
8.5 years ago by Nicolas Rosewick 11k
1
vote
1
reply
2.6k
views
Remove low-complexity region from bed file
low complexity bed
8.6 years ago by Nicolas Rosewick 11k
0
votes
0
replies
2.9k
views
Comment: C: Counting reads within regions of interest
8.6 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.9k
views
Answer: A: Counting reads within regions of interest
8.6 years ago by Nicolas Rosewick 11k
2
votes
1
reply
1.8k
views
How to list genomic regions that are close in a 3D conformation manner using Hi-C data ?
Hi-C
updated 8.6 years ago by ▴ 280 • written 8.7 years ago by 11k
0
votes
1
reply
4.7k
views
Comment: C: Is reference genome same for DNA and RNA sequence alignment
8.6 years ago by Nicolas Rosewick 11k
2
votes
1
reply
4.7k
views
Comment: C: Is reference genome same for DNA and RNA sequence alignment
8.6 years ago by Nicolas Rosewick 11k
1
vote
0
replies
4.7k
views
Comment: C: Is reference genome same for DNA and RNA sequence alignment
8.6 years ago by Nicolas Rosewick 11k
0
votes
0
replies
1.5k
views
Comment: C: Compute test-score statistical significance using control-scores from shuffled p
8.6 years ago by Nicolas Rosewick 11k
0
votes
0
replies
1.8k
views
Comment: C: IGV: Load custom data (chr, start, end, strand, sample)
8.6 years ago by Nicolas Rosewick 11k
0
votes
2
replies
1.8k
views
IGV: Load custom data (chr, start, end, strand, sample)
IGV
updated 8.6 years ago by 15k • written 8.6 years ago by 11k
0
votes
0
replies
3.0k
views
Comment: C: I loaded a DNA-seq BAM file in IGV but I can't see anything
8.7 years ago by Nicolas Rosewick 11k
3
votes
2
replies
1.6k
views
450K complex design
450K
updated 2.2 years ago by 44k • written 9.0 years ago by 11k
0
votes
0
replies
1.4k
views
Comment: C: Can a lack of exome coverage disproportionately call snRNAs as significantly cha
8.7 years ago by Nicolas Rosewick 11k
1
vote
9
replies
2.3k
views
7 follow
Are these reads all PCR replicates ?
dna-seq
updated 8.7 years ago by ▴ 700 • written 8.7 years ago by 11k
1
vote
1
reply
1.6k
views
Comment: C: unexpect results from p.adjust?
8.7 years ago by Nicolas Rosewick 11k
0
votes
1
reply
2.3k
views
Comment: C: Are these reads all PCR replicates ?
8.7 years ago by Nicolas Rosewick 11k
0
votes
0
replies
2.3k
views
Comment: C: Are these reads all PCR replicates ?
8.7 years ago by Nicolas Rosewick 11k
0
votes
1
reply
8.0k
views
Comment: Comment: RNA-STAR, mapping problem (number of reads)
updated 2.3 years ago by 44k • written 8.7 years ago by 11k
0
votes
1
reply
8.0k
views
Comment: C: RNA-STAR, mapping problem (number of reads)
8.7 years ago by Nicolas Rosewick 11k
0
votes
0
replies
3.2k
views
Comment: C: Aligning reads to genome together with transcriptome
8.7 years ago by Nicolas Rosewick 11k
0
votes
0
replies
20k
views
Comment: Comment: how to use log transformation with read count data?
updated 3.6 years ago by 44k • written 8.7 years ago by 11k
1
vote
0
replies
1.4k
views
Align HTS on microsatellite
microsatellite DNA-Seq
updated 2.3 years ago by 44k • written 8.7 years ago by 11k
14
votes
13
replies
15k
views
11 follow
Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
rna-seq visualization strand
updated 8.8 years ago by ▴ 130 • written 11.7 years ago by 11k
1
vote
0
replies
2.0k
views
Comment: C: Identify miRNA from deep RNA sequencing
8.8 years ago by Nicolas Rosewick 11k
3
votes
2
replies
6.3k
views
Tophat: How Many Allowed Mismatch ?
tophat
updated 8.9 years ago by 20 • written 12.6 years ago by 11k
0
votes
0
replies
7.4k
views
Comment: C: How to TMM after HTSeq-count?
8.9 years ago by Nicolas Rosewick 11k
0
votes
0
replies
1.9k
views
Comment: C: [BIOINFORMATICS?] Compare two methods
8.9 years ago by Nicolas Rosewick 11k
0
votes
1
reply
3.1k
views
Comment: C: qRT-PCR analysis : average triplicates for statistical testing
8.9 years ago by Nicolas Rosewick 11k
0
votes
1
reply
3.1k
views
Comment: C: qRT-PCR analysis : average triplicates for statistical testing
8.9 years ago by Nicolas Rosewick 11k
0
votes
4
replies
3.1k
views
qRT-PCR analysis : average triplicates for statistical testing
qrt-pcr replicates statistics
updated 2.2 years ago by 44k • written 8.9 years ago by 11k
0
votes
0
replies
1.9k
views
450K annotation (ENSEMBL)
450K annotation
updated 2.2 years ago by 44k • written 8.9 years ago by 11k
1,080 results • Page 13 of 22
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6