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1
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1
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3.6k
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Answer: A: The best aligner to align RNA-Seq data into mitochondria genome
8.9 years ago by Nicolas Rosewick 11k
0
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0
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1.6k
views
Comment: C: 450K complex design
8.9 years ago by Nicolas Rosewick 11k
103
votes
6
replies
66k
views
6 follow
Insert Size And Fragment Size ?
3.0 years ago by Nicolas Rosewick 11k
1
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0
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7.8k
views
Answer: A: Human transcriptome reference for RNASeq analysis
9.0 years ago by Nicolas Rosewick 11k
6
votes
11
replies
6.0k
views
Sequence Identity : Nucleotide Resolution
sequence
updated 9.0 years ago by 20 • written 12.4 years ago by 11k
0
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0
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14k
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Comment: C: retrieve normalised count data from DESeq2
9.0 years ago by Nicolas Rosewick 11k
0
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0
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1.9k
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Comment: C: How to assess non-randomness of viral integration in the genome
9.1 years ago by Nicolas Rosewick 11k
0
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1
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1.9k
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Comment: Comment: How to assess non-randomness of viral integration in the genome
updated 2.2 years ago by 44k • written 9.1 years ago by 11k
1
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4
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1.9k
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How to assess non-randomness of viral integration in the genome
integration randomness
updated 2.2 years ago by 44k • written 9.1 years ago by 11k
5
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1
reply
2.8k
views
Answer: Answer: Analysis past the differentially expressed genes: RNAseq
updated 2.2 years ago by 44k • written 9.1 years ago by 11k
0
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0
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2.0k
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Comment: C: How can I ask bedops element-of to add additional informations in its output ?
9.1 years ago by Nicolas Rosewick 11k
1
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2
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2.0k
views
How can I ask bedops element-of to add additional informations in its output ?
bedops
updated 9.1 years ago by 35k • written 9.1 years ago by 11k
3
votes
8
replies
15k
views
Tophat2 : Error: Segment-Based Junction Search Failed With Err =-11
tophat error
updated 9.1 years ago by ▴ 640 • written 12.2 years ago by 11k
0
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0
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11k
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Comment: C: What is a typical workflow to correlate methylation and expression data?
9.1 years ago by Nicolas Rosewick 11k
0
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0
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11k
views
Comment: C: What is a typical workflow to correlate methylation and expression data?
9.1 years ago by Nicolas Rosewick 11k
1
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1
reply
6.7k
views
Comment: Comment: sorting my data based on p-value
updated 2.1 years ago by 44k • written 9.2 years ago by 11k
0
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1
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3.2k
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Comment: C: More than 60000 records with unique ENSG tag in ensGene.txt.gz downloaded from U
9.2 years ago by Nicolas Rosewick 11k
1
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0
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2.9k
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Comment: C: Estimate gene flow between two populations?
9.2 years ago by Nicolas Rosewick 11k
0
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1
reply
2.5k
views
Align long nanopore minion cDNA reads
nanopore alignment long-reads
updated 2.1 years ago by 44k • written 9.2 years ago by 11k
2
votes
1
reply
1.8k
views
Comment: C: Recent RNA-Seq Analysis reviews
9.2 years ago by Nicolas Rosewick 11k
1
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0
replies
2.9k
views
Comment: C: How can I make the bar graph of genes from BLAST result?
9.2 years ago by Nicolas Rosewick 11k
1
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1
reply
3.3k
views
Comment: C: RNA-seq analysis without grouping data
9.2 years ago by Nicolas Rosewick 11k
0
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1
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12k
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Comment: C: Transpose a large dataset
9.2 years ago by Nicolas Rosewick 11k
0
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1
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12k
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Comment: C: Transpose a large dataset
9.2 years ago by Nicolas Rosewick 11k
0
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1
reply
12k
views
Comment: Comment: Transpose a large dataset
updated 2.1 years ago by 44k • written 9.2 years ago by 11k
0
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3
replies
12k
views
Answer: Answer: Transpose a large dataset
updated 2.1 years ago by 44k • written 9.2 years ago by 11k
0
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0
replies
3.6k
views
Answer: Answer: Bowtie 2 for circular RNAs
updated 2.1 years ago by 44k • written 9.2 years ago by 11k
1
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1
reply
3.0k
views
Comment: C: differential expression analysis tools for single end reads
9.2 years ago by Nicolas Rosewick 11k
0
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1
reply
2.6k
views
Comment: Comment: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
updated 2.0 years ago by 44k • written 9.3 years ago by 11k
1
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1
reply
2.6k
views
Comment: C: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
9.3 years ago by Nicolas Rosewick 11k
8
votes
7
replies
11k
views
Tophat: Compressed Fastq File (Gz)
tophat
updated 9.3 years ago by 20 • written 12.6 years ago by 11k
0
votes
1
reply
2.4k
views
Polyadenylation cleavage sites detection from rRNA-depleted RNA-Seq
polyA RNA-Seq
updated 9.3 years ago by 20 • written 9.3 years ago by 11k
0
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1
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2.0k
views
Comment: C: Extracting transcriptonally perturbated gene subnetworks using a list of target
9.3 years ago by Nicolas Rosewick 11k
1
vote
3
replies
2.0k
views
Extracting transcriptonally perturbated gene subnetworks using a list of target genes, RNA-Seq data and pathway informations
RNA-Seq subnetwork pathway
updated 23 months ago by 44k • written 9.3 years ago by 11k
1
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1
reply
2.7k
views
Comment: C: How to visualise RNAseq baits in a genomic context
9.4 years ago by Nicolas Rosewick 11k
0
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0
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6.1k
views
Comment: C: How to extract reads supporting protein-coding gene splice junctions from STAR's
9.4 years ago by Nicolas Rosewick 11k
5
votes
3
replies
6.1k
views
How to extract reads supporting protein-coding gene splice junctions from STAR's SJ.out.tab output
splice STAR
updated 22 months ago by 44k • written 9.4 years ago by 11k
0
votes
1
reply
2.0k
views
450K - ChAMP : How to analyse 5-hmc data ?
champ methylation 450k
updated 22 months ago by 44k • written 9.4 years ago by 11k
1
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0
replies
2.7k
views
Answer: A: RNAseq design: differential expression between sexes in several species
9.4 years ago by Nicolas Rosewick 11k
0
votes
0
replies
7.1k
views
Comment: Comment: DESeq2 multiple factor design clarification
updated 22 months ago by 44k • written 9.4 years ago by 11k
0
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1
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7.1k
views
Comment: C: DESeq2 multiple factor design clarification
9.4 years ago by Nicolas Rosewick 11k
0
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1
reply
7.1k
views
Comment: C: DESeq2 multiple factor design clarification
9.4 years ago by Nicolas Rosewick 11k
0
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1
reply
7.1k
views
Comment: Comment: DESeq2 multiple factor design clarification
updated 22 months ago by 44k • written 9.4 years ago by 11k
19
votes
14
replies
7.1k
views
DESeq2 multiple factor design clarification
deseq2 design
updated 22 months ago by 44k • written 9.4 years ago by 11k
0
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1
reply
2.8k
views
Extracting gene subnetwork from pathways using gene expression data
gene-subnetwork pathway active-module
updated 22 months ago by 44k • written 9.6 years ago by 11k
0
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0
replies
9.3k
views
Comment: C: DESeq2: Error: $ operator is invalid for atomic vectors using DESeqDataSetFromMa
9.5 years ago by Nicolas Rosewick 11k
0
votes
1
reply
9.3k
views
Comment: Comment: DESeq2: Error: $ operator is invalid for atomic vectors using DESeqDataSetFromMa
updated 21 months ago by 44k • written 9.5 years ago by 11k
6
votes
4
replies
9.3k
views
DESeq2: Error: $ operator is invalid for atomic vectors using DESeqDataSetFromMatrix
deseq2 DESeqDataSetFromMatrix
updated 21 months ago by 44k • written 9.5 years ago by 11k
8
votes
3
replies
5.8k
views
tRNA expression analysis from RNA-Seq
tRNA RNA-Seq
updated 2.3 years ago by 44k • written 9.5 years ago by 11k
1
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1
reply
4.3k
views
Answer: Answer: how much cpu and RAM needed to assemble transcriptome by using trinity
updated 21 months ago by 44k • written 9.5 years ago by 11k
1,080 results • Page 14 of 22
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