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7
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1
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3.9k
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Answer: A: What is your preferred way to map cDNA sequences to genome?
9.5 years ago by Nicolas Rosewick 11k
1
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1
reply
5.1k
views
Comment: Comment: Counting reads supporting a specific splice junction from bam file
updated 2.3 years ago by 44k • written 9.5 years ago by 11k
3
votes
6
replies
5.1k
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Counting reads supporting a specific splice junction from bam file
splice junction bam
updated 2.3 years ago by 44k • written 9.5 years ago by 11k
0
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1
reply
2.1k
views
Comment: C: Sample-matched RNA-Seq gene expression analysis
9.6 years ago by Nicolas Rosewick 11k
0
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3
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2.1k
views
Sample-matched RNA-Seq gene expression analysis
RNA-Seq
9.6 years ago by Nicolas Rosewick 11k
2
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5
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3.1k
views
Filter Gtf With Another Gtf
gtf filter
updated 9.6 years ago by 20 • written 11.5 years ago by 11k
1
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0
replies
9.6k
views
Comment: Comment: How to adjust my manhattan plot to look better?
updated 2.4 years ago by 44k • written 9.6 years ago by 11k
1
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0
replies
9.6k
views
Comment: Comment: How to adjust my manhattan plot to look better?
updated 2.4 years ago by 44k • written 9.6 years ago by 11k
1
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2
replies
9.6k
views
Comment: C: How to adjust my manhattan plot to look better?
9.6 years ago by Nicolas Rosewick 11k
0
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1
reply
6.3k
views
Answer: A: longest transcript NCBI NM_ids
9.6 years ago by Nicolas Rosewick 11k
1
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0
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1.5k
views
Answer: A: Should I do RNAseq?
9.6 years ago by Nicolas Rosewick 11k
4
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5
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4.0k
views
How To Find Known Local Secondary Structures In Rna
rna structure
updated 9.6 years ago by ▴ 20 • written 11.2 years ago by 11k
1
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0
replies
12k
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Comment: C: bwa mem on a bam file
9.6 years ago by Nicolas Rosewick 11k
1
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0
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2.5k
views
Answer: Answer: Life cycle of a fastq file
updated 2.5 years ago by 44k • written 9.6 years ago by 11k
1
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0
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34k
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Comment: C: Is Tophat The Only Mapper To Consider For Rna-Seq Data?
9.6 years ago by Nicolas Rosewick 11k
0
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0
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2.3k
views
Genomic data (DNA-Seq, Exome, RNA-Seq, ...) to infer metastasis phylogenetic tree
metastasis phylogenetic
updated 2.5 years ago by 44k • written 9.7 years ago by 11k
1
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0
replies
2.2k
views
Is it normal to find mRNA traces in small RNA-Seq ?
smallRNA-Seq mRNA
updated 2.5 years ago by 44k • written 9.7 years ago by 11k
1
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1
reply
4.2k
views
Comment: Comment: Where can I find fusion gene sequences? Thanks!
updated 2.5 years ago by 44k • written 9.7 years ago by 11k
1
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1
reply
4.2k
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Comment: C: Where can I find fusion gene sequences? Thanks!
9.7 years ago by Nicolas Rosewick 11k
0
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1
reply
26k
views
Answer: Answer: filter out multiple rows based on values in columns - perl and R attempt
updated 2.5 years ago by 44k • written 9.7 years ago by 11k
0
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1
reply
3.8k
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Comment: Comment: Runtime Needleman-Wunsch & Gotoh
updated 2.6 years ago by 44k • written 9.7 years ago by 11k
2
votes
7
replies
2.9k
views
Forum: How do you manage a large number of samples ( storage, analysis,...) ?
samples hts
updated 19 months ago by 44k • written 9.8 years ago by 11k
1
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0
replies
4.8k
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Comment: Comment: Calculating percentage of A C U G content
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
4.8k
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Comment: Comment: Calculating percentage of A C U G content
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
4.8k
views
Comment: Comment: Calculating percentage of A C U G content
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
2
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1
reply
4.8k
views
Answer: Answer: Calculating percentage of A C U G content
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
2.6k
views
Comment: Comment: how many RAM and CPU are required to perform comprehensive NGS analysis?
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
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2.6k
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Answer: Answer: how many RAM and CPU are required to perform comprehensive NGS analysis?
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
7.5k
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Comment: C: DEXSeq Expression and Usage Metrics
9.8 years ago by Nicolas Rosewick 11k
1
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1
reply
8.7k
views
Comment: Comment: Where can I find transcriptome databases?
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
8.7k
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Comment: Comment: Where can I find transcriptome databases?
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
1
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0
replies
4.0k
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Comment: Comment: Chromosome Data -- Only genes for given chromosome, without introns and with ann
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
1
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1
reply
2.3k
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Comment: Comment: Extraction of (two) sequence variants from exons
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
1
vote
7
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1.9k
views
Small genomic region proximity enrichment
enrichment genomic proximity
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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0
replies
6.7k
views
Comment: Comment: How to extract contigs from FASTA file which contains specific sequence
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
1
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1
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6.7k
views
Answer: Answer: How to extract contigs from FASTA file which contains specific sequence
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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0
replies
1.9k
views
Comment: Comment: Small genomic region proximity enrichment
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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0
replies
1.9k
views
Comment: Comment: Small genomic region proximity enrichment
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
1.9k
views
Comment: Comment: Small genomic region proximity enrichment
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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0
replies
4.4k
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Comment: C: 1 vs Multiple sample expression RNA-Seq analysis
9.8 years ago by Nicolas Rosewick 11k
0
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1
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4.4k
views
Comment: Comment: 1 vs Multiple sample expression RNA-Seq analysis
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
4.4k
views
Comment: Comment: 1 vs Multiple sample expression RNA-Seq analysis
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
1
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0
replies
3.9k
views
Comment: Comment: question about unstranded RNA-seq
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
4
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9
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4.4k
views
1 vs Multiple sample expression RNA-Seq analysis
RNA-Seq
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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1
reply
4.4k
views
Comment: Comment: 1 vs Multiple sample expression RNA-Seq analysis
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
votes
0
replies
2.2k
views
Assess downstream exon expression disturbed by a mutation using RNA-Seq
dexseq exon RNA-Seq mutation
updated 2.6 years ago by 44k • written 9.8 years ago by 11k
0
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0
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9.0k
views
Comment: Comment: Blast a gene against one genome
updated 2.6 years ago by 44k • written 9.9 years ago by 11k
1
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0
replies
9.8k
views
Answer: A: Bedtools genomecov to identify regions at any coverage
9.9 years ago by Nicolas Rosewick 11k
2
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0
replies
4.7k
views
Answer: A: Application of Hi-C
9.9 years ago by Nicolas Rosewick 11k
11
votes
8
replies
6.8k
views
7 follow
Best Bioinformatic And Molecular Biology Software Package
software molecular viewer subjective
updated 9.9 years ago by • 0 • written 13.0 years ago by 11k
1,080 results • Page 15 of 22
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