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Comment:
Comment: Similar tools to visualize pileup of long-read alignments to a STR locus
8 weeks ago by
WouterDeCoster
47k
1
vote
0
replies
610
views
Comment:
Comment: validation approach for CNVs
5 months ago by
WouterDeCoster
47k
0
votes
1
reply
785
views
Comment:
Comment: Identify and count gaps in sam/bam files
9 months ago by
WouterDeCoster
47k
0
votes
1
reply
2.0k
views
Comment:
Comment: pbmm2 alignment of long reads
9 months ago by
WouterDeCoster
47k
0
votes
1
reply
788
views
Comment:
Comment: minimap2 U to T conversion
9 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.5k
views
Comment:
Comment: Help aligning Nanopore Long Read RNA seqs
9 months ago by
WouterDeCoster
47k
1
vote
1
reply
1.5k
views
Comment:
Comment: Help aligning Nanopore Long Read RNA seqs
9 months ago by
WouterDeCoster
47k
0
votes
1
reply
603
views
Comment:
Comment: vcf phasing
10 months ago by
WouterDeCoster
47k
0
votes
0
replies
662
views
Comment:
Comment: Filter BAM to keep only alignments at an interval, ignoring reads spliced over
11 months ago by
WouterDeCoster
47k
1
vote
3
replies
662
views
Filter BAM to keep only alignments at an interval, ignoring reads spliced over
samtools
bam
splicing
11 months ago by
WouterDeCoster
47k
2
votes
1
reply
2.0k
views
Answer:
Answer: Is it possible to access the code of a bioinformatics article?
14 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.1k
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Comment:
Comment: Find reference fasta based on M5/MD5 string
14 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.1k
views
Comment:
Comment: Find reference fasta based on M5/MD5 string
14 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.5k
views
Comment:
Comment: Isolating and extracting regions in VCF file
14 months ago by
WouterDeCoster
47k
3
votes
4
replies
1.1k
views
Find reference fasta based on M5/MD5 string
reference
fasta
14 months ago by
WouterDeCoster
47k
0
votes
0
replies
887
views
Comment:
Comment: Re-format sample columns in VCF file
14 months ago by
WouterDeCoster
47k
0
votes
1
reply
2.5k
views
Comment:
Comment: ONT Raw Read Sequencing Pipeline
14 months ago by
WouterDeCoster
47k
0
votes
1
reply
1.4k
views
Comment:
Comment: somatic variant calling without matched normal in long-reads
14 months ago by
WouterDeCoster
47k
0
votes
1
reply
2.5k
views
Comment:
Comment: ONT Raw Read Sequencing Pipeline
14 months ago by
WouterDeCoster
47k
0
votes
1
reply
2.5k
views
Comment:
Comment: ONT Raw Read Sequencing Pipeline
14 months ago by
WouterDeCoster
47k
0
votes
1
reply
3.3k
views
Comment:
Comment: How to speed Salmon index up
14 months ago by
WouterDeCoster
47k
2
votes
1
reply
1.9k
views
Comment:
Comment: Snakemake rule error
15 months ago by
WouterDeCoster
47k
0
votes
0
replies
714
views
Comment:
Comment: how do I assemble centromere regions in a plant genome?
16 months ago by
WouterDeCoster
47k
0
votes
0
replies
637
views
Comment:
Comment: DOES MGI SEQUENCING RESULT CONTAINS MULTIPLE FILES FOR SINGLE SAMPLE
16 months ago by
WouterDeCoster
47k
0
votes
0
replies
3.4k
views
Comment:
Comment: How to remove fasta headers in a multifasta file and write file name as a fasta
19 months ago by
WouterDeCoster
47k
1
vote
0
replies
1.4k
views
Comment:
Comment: Expected number of raw reads in fq.gz files in PE sequencing
19 months ago by
WouterDeCoster
47k
0
votes
0
replies
433
views
Number of reads per gene in pseudobulk with more or fewer nuclei
nuclei
10x
sequencing
19 months ago by
WouterDeCoster
47k
0
votes
1
reply
3.4k
views
Comment:
Comment: Create a reference genome from aligned bam file
19 months ago by
WouterDeCoster
47k
2
votes
1
reply
2.0k
views
Comment:
Comment: Batch correction for Nanopore RNAseq
21 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.1k
views
Comment:
Comment: Extract samples from a VCF file that contain marker
21 months ago by
WouterDeCoster
47k
0
votes
1
reply
940
views
Answer:
Answer: rust_htslib unrecognized filter ID
21 months ago by
WouterDeCoster
47k
0
votes
0
replies
889
views
Answer:
Answer: Truvari error: Failed to parse TBX_VCF - "ead mapping qualities">"
21 months ago by
WouterDeCoster
47k
0
votes
0
replies
715
views
Comment:
Comment: Pairwise Alignment
22 months ago by
WouterDeCoster
47k
0
votes
1
reply
4.3k
views
Comment:
Comment: minimap's SAM file MAPQ value for the unique alignments
22 months ago by
WouterDeCoster
47k
1
vote
0
replies
835
views
Comment:
Comment: Colleges
22 months ago by
WouterDeCoster
47k
0
votes
1
reply
1.4k
views
Answer:
Answer: SyntaxError (Perhaps you forgot a comma?) in snakefile when running FastQC.
22 months ago by
WouterDeCoster
47k
1
vote
0
replies
1.1k
views
Comment:
Comment: rna long read length distibution
22 months ago by
WouterDeCoster
47k
0
votes
0
replies
799
views
Comment:
Comment: Mapping reads to a multifasta reference
22 months ago by
WouterDeCoster
47k
0
votes
1
reply
1.5k
views
Comment:
Comment: Estimate sizes of repeats in a especific Gene
22 months ago by
WouterDeCoster
47k
1
vote
0
replies
2.9k
views
Comment:
Comment: How to Diagnose Fragile X from Whole Genome Sequencing
22 months ago by
WouterDeCoster
47k
1
vote
1
reply
2.9k
views
Comment:
Comment: How to Diagnose Fragile X from Whole Genome Sequencing
22 months ago by
WouterDeCoster
47k
0
votes
0
replies
2.7k
views
Comment:
Comment: Nanopore config files
22 months ago by
WouterDeCoster
47k
0
votes
1
reply
2.7k
views
Answer:
Answer: Nanopore config files
22 months ago by
WouterDeCoster
47k
0
votes
0
replies
808
views
Comment:
Comment: Change VCF File Reference Genome to a Local .FA File
23 months ago by
WouterDeCoster
47k
0
votes
1
reply
1.4k
views
Comment:
Comment: problem with bedtools getfasta
23 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.2k
views
Answer:
Answer: htseq-count : dosen't show options in bash ln ubuntu
23 months ago by
WouterDeCoster
47k
0
votes
0
replies
1.6k
views
Comment:
Comment: Genome sequenced [%] over time graph (Nanopore)
24 months ago by
WouterDeCoster
47k
3
votes
0
replies
1.6k
views
Comment:
Comment: Genome sequenced [%] over time graph (Nanopore)
24 months ago by
WouterDeCoster
47k
0
votes
1
reply
1.6k
views
Comment:
Comment: Genome sequenced [%] over time graph (Nanopore)
24 months ago by
WouterDeCoster
47k
0
votes
1
reply
1.7k
views
Comment:
Comment: How can I generate VCF file with two different assembled genome fasta?
24 months ago by
WouterDeCoster
47k
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