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1.1k
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How to make annotation file for WGCNA analysis of RNA Seq data?
next-gen
updated 4.6 years ago by 88k • written 4.6 years ago by ▴ 80
0
votes
2
replies
1.1k
views
DEGS analysis with DESeq2?
DESeq2 DEGs
updated 4.6 years ago by 20 • written 4.8 years ago by ▴ 80
0
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0
replies
925
views
lncRNA prediction using CPAT?
CPAT lncRNA
4.7 years ago by mathavanbioinfo ▴ 80
0
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0
replies
1.5k
views
Comment: C: CPAT error while analysis
4.7 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
864
views
DEGs analysis with StringTie results?
StringTie DEGs DESeq2
4.8 years ago by mathavanbioinfo ▴ 80
0
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0
replies
3.3k
views
Comment: A: construction of draft genome from the contigs
4.8 years ago by mathavanbioinfo ▴ 80
0
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1
reply
2.5k
views
Comment: C: How to get GTF file for Rousettus_aegyptiacus?
4.8 years ago by mathavanbioinfo ▴ 80
1
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1
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2.5k
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Comment: A: How to get GTF file for Rousettus_aegyptiacus?
4.8 years ago by mathavanbioinfo ▴ 80
4
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8
replies
2.5k
views
How to get GTF file for Rousettus_aegyptiacus?
StringTie GTF Assembly Rousettus aegyptiacus
4.8 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
1.0k
views
How to construct draft genome of virus using Trinity de novo assembler?
RNA virus amplicons trintiy
4.8 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
2.5k
views
Comment: C: How to get GTF file for Rousettus_aegyptiacus?
4.8 years ago by mathavanbioinfo ▴ 80
0
votes
4
replies
2.2k
views
How to extract 3', 5' UTR sequences from genbank records using python, PERL and R code?
UTR
updated 4.9 years ago by ▴ 120 • written 4.9 years ago by ▴ 80
0
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0
replies
840
views
Comment: C: Is virus specific UTR prediction tool available?
4.9 years ago by mathavanbioinfo ▴ 80
0
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2
replies
840
views
Is virus specific UTR prediction tool available?
UTR
4.9 years ago by mathavanbioinfo ▴ 80
0
votes
0
replies
575
views
Best assembler for WGS for RNA viruses?
WGS
4.9 years ago by mathavanbioinfo ▴ 80
0
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0
replies
1.4k
views
Comment: C: Downloading RNA-Seq Dataset
5.1 years ago by mathavanbioinfo ▴ 80
1
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1
reply
3.2k
views
Answer: C: Question on performing RMA normalization
5.1 years ago by mathavanbioinfo ▴ 80
1
vote
0
replies
1.9k
views
Comment: C: STRING does not support networks larger than 2000 nodes.
5.1 years ago by mathavanbioinfo ▴ 80
2
votes
1
reply
879
views
How to create matrix for larger data set?
matrix RNA-Seq
updated 5.1 years ago by 85k • written 5.1 years ago by ▴ 80
0
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0
replies
1.0k
views
What is the differences in index building by hisat with or without exon, splicing variant files?
lncRNA RNA-Seq hisat2
5.2 years ago by mathavanbioinfo ▴ 80
0
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0
replies
1.6k
views
How to convert agilent probe id into gene symbol in gene expression matrix?
agilent probe conversion
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
4.3k
views
Comment: Comment: Normalization agilent microarray data?
updated 3.6 years ago by 44k • written 5.2 years ago by ▴ 80
0
votes
0
replies
867
views
Novel lncRNA identification and quantification RNA seq?
RNA-Seq sequencing assembly hisat2 lncRNA
5.2 years ago by mathavanbioinfo ▴ 80
1
vote
1
reply
4.3k
views
Comment: C: Normalization agilent microarray data?
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
4.3k
views
Comment: C: Normalization agilent microarray data?
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
4.3k
views
Comment: C: Normalization agilent microarray data?
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
4.3k
views
Comment: C: Normalization agilent microarray data?
5.2 years ago by mathavanbioinfo ▴ 80
3
votes
21
replies
4.3k
views
Normalization agilent microarray data?
Microarray Normalization
updated 3.6 years ago by 44k • written 5.2 years ago by ▴ 80
1
vote
4
replies
1.7k
views
How to extract lncRNA from CPC2 output?
RNA-Seq Assembly next-gen
updated 5.2 years ago by ▴ 160 • written 5.2 years ago by ▴ 80
0
votes
1
reply
704
views
Comment: C: Is there any range for significant count of DEGs?
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
4
replies
704
views
Is there any range for significant count of DEGs?
RNA-Seq rna-seq gene
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
0
replies
1.7k
views
Comment: C: How to extract lncRNA from CPC2 output?
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
0
replies
1.7k
views
Comment: C: How to extract lncRNA from CPC2 output?
5.2 years ago by mathavanbioinfo ▴ 80
0
votes
2
replies
643
views
Where I can download index files for Rousettus aegyptiacus?
genome rna-seq assembly
updated 5.3 years ago by ★ 3.6k • written 5.3 years ago by ▴ 80
0
votes
2
replies
879
views
How Interpret the hisat2 output?
ngs
updated 5.4 years ago by 3.2k • written 5.4 years ago by ▴ 80
0
votes
1
reply
894
views
What is acceptable optimal overall percentage of Hisat2?
rna-seq
5.4 years ago by mathavanbioinfo ▴ 80
0
votes
0
replies
1.3k
views
How to compare time series data of gene expression studies?
sequencing
6.9 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
1.5k
views
microarray data analysis GEO2R results?
gene
7.1 years ago by mathavanbioinfo ▴ 80
0
votes
0
replies
3.2k
views
Comment: C: single probe represent multiple genes?
7.8 years ago by mathavanbioinfo ▴ 80
2
votes
4
replies
3.2k
views
single probe represent multiple genes?
R
updated 7.8 years ago by ★ 2.0k • written 7.8 years ago by ▴ 80
0
votes
1
reply
1.4k
views
What are all the different methods available for identifying the DEG?
Microarray Limma
7.9 years ago by mathavanbioinfo ▴ 80
0
votes
1
reply
1.9k
views
Pathway analysis of miRNA?
next-gen
updated 8.5 years ago by 20 • written 8.6 years ago by ▴ 80
1
vote
3
replies
4.4k
views
Microarray adata Normalization using GEO2R?
gene
updated 8.6 years ago by ▴ 20 • written 8.7 years ago by ▴ 80
0
votes
2
replies
2.8k
views
Comment: C: Up and Down regulated genes
8.7 years ago by mathavanbioinfo ▴ 80
2
votes
7
replies
2.8k
views
Up and Down regulated genes
next-gen
8.7 years ago by mathavanbioinfo ▴ 80
4
votes
2
replies
2.4k
views
Differential gene expression
next-gen
updated 8.7 years ago by ▴ 220 • written 8.7 years ago by ▴ 80
0
votes
2
replies
1.9k
views
Meta analysis of microarray data merits and demerits
gene
updated 8.7 years ago by 20 • written 8.7 years ago by ▴ 80
0
votes
2
replies
1.9k
views
MIcroarray data analysis?
next-gen
updated 8.7 years ago by 8.3k • written 8.7 years ago by ▴ 80
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