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0
votes
1
reply
834
views
Comment:
Comment: Shell scripts and grep, awk command
2.0 years ago by
boaty
▴ 220
3
votes
5
replies
2.0k
views
Any idea about extracting bacteria related proteins(or protein clusters) from uniref90 database?
uniref
uniProt
updated 2.7 years ago by
mario_de_manner
▴ 20 • written 3.3 years ago by
boaty
▴ 220
0
votes
0
replies
1.2k
views
Comment:
Comment: Popular viral Metagenomics data analysis tool in 2022?
2.7 years ago by
boaty
▴ 220
0
votes
0
replies
1.2k
views
Comment:
Comment: Popular viral Metagenomics data analysis tool in 2022?
2.7 years ago by
boaty
▴ 220
1
vote
0
replies
1.2k
views
Answer:
Answer: MetaPhlAn 3.0
2.7 years ago by
boaty
▴ 220
4
votes
3
replies
1.2k
views
Popular viral Metagenomics data analysis tool in 2022?
virus
gut
microbe
Metagenome
2.7 years ago by
boaty
▴ 220
1
vote
1
reply
1.2k
views
Comment:
Comment: More results when prefiltering in DESeq2
3.2 years ago by
boaty
▴ 220
0
votes
0
replies
2.0k
views
Comment:
Comment: Any idea about extracting bacteria related proteins(or protein clusters) from un
3.3 years ago by
boaty
▴ 220
0
votes
0
replies
2.0k
views
Comment:
Comment: Any idea about extracting bacteria related proteins(or protein clusters) from un
3.3 years ago by
boaty
▴ 220
0
votes
0
replies
1.6k
views
Comment:
Comment: ATACseq batch effect coupled with biological effect
3.5 years ago by
boaty
▴ 220
1
vote
1
reply
1.6k
views
Comment:
Comment: ATACseq batch effect coupled with biological effect
3.6 years ago by
boaty
▴ 220
1
vote
2
replies
108k
views
Comment:
Comment: Using R in Conda
3.6 years ago by
boaty
▴ 220
0
votes
0
replies
1.1k
views
Answer:
Answer: Tool to run statistics on a list of genes and output associated conditions/pheno
3.6 years ago by
boaty
▴ 220
3
votes
0
replies
676
views
Looking for a tool for metadata management
management
relational
metadata
database
3.6 years ago by
boaty
▴ 220
1
vote
0
replies
2.1k
views
Answer:
Answer: Filtering out non-bacterial genomes from metagenomic data
3.6 years ago by
boaty
▴ 220
0
votes
0
replies
3.2k
views
Comment:
C: Better way for speedup of Humann3 metagenomics analysis pipeline?
3.8 years ago by
boaty
▴ 220
1
vote
2
replies
3.2k
views
Better way for speedup of Humann3 metagenomics analysis pipeline?
alignment
metagenomics
humann
pipeline
updated 3.8 years ago by
Raygozak
★ 1.4k • written 4.4 years ago by
boaty
▴ 220
0
votes
0
replies
934
views
Comment:
C: tool to convert cytokine name for pathway enrichment?
4.3 years ago by
boaty
▴ 220
1
vote
2
replies
934
views
tool to convert cytokine name for pathway enrichment?
cytokine
4.3 years ago by
boaty
▴ 220
0
votes
0
replies
831
views
is it possible to get a .jplace file from a phyloseq obj?
tree
phyloseq
pplacer
taxtastic
phyml
4.6 years ago by
boaty
▴ 220
1
vote
0
replies
1.5k
views
Answer:
A: htseq count error
4.7 years ago by
boaty
▴ 220
0
votes
1
reply
1.0k
views
Comment:
C: best R package for tree(data structure) in 2020?
4.7 years ago by
boaty
▴ 220
3
votes
3
replies
1.0k
views
best R package for tree(data structure) in 2020?
R
tree
pacakge
updated 4.7 years ago by
Kevin Blighe
88k • written 4.7 years ago by
boaty
▴ 220
0
votes
1
reply
1.5k
views
Comment:
C: htseq coun error
4.7 years ago by
boaty
▴ 220
1
vote
0
replies
990
views
Comment:
C: is there a method like PLS-DA, but for a quantitative Y value?
4.7 years ago by
boaty
▴ 220
3
votes
2
replies
990
views
is there a method like PLS-DA, but for a quantitative Y value?
PLS
PLS-DA
updated 4.7 years ago by
Kevin Blighe
88k • written 4.7 years ago by
boaty
▴ 220
0
votes
0
replies
2.0k
views
Answer:
A: How to split sequence in fasta file based on long runs of Ns?
4.7 years ago by
boaty
▴ 220
1
vote
1
reply
4.4k
views
Comment:
C: How to make differential expression analysis with normalized data?
5.2 years ago by
boaty
▴ 220
0
votes
1
reply
4.4k
views
Comment:
C: How to make differential expression analysis with normalized data?
5.2 years ago by
boaty
▴ 220
2
votes
0
replies
2.9k
views
Answer:
A: Why I have too many reads non uniquely aligned?
5.2 years ago by
boaty
▴ 220
0
votes
0
replies
1.5k
views
Comment:
C: concern about statistical model after more than 78% of genes are differentially
5.4 years ago by
boaty
▴ 220
0
votes
0
replies
1.5k
views
Comment:
C: concern about statistical model after more than 78% of genes are differentially
5.4 years ago by
boaty
▴ 220
4
votes
9
replies
1.5k
views
concern about statistical model after more than 78% of genes are differentially expressed according to DESeq2?
deseq2
rnaseq
5.4 years ago by
boaty
▴ 220
0
votes
0
replies
1.5k
views
Comment:
C: concern about statistical model after more than 78% of genes are differentially
5.4 years ago by
boaty
▴ 220
0
votes
0
replies
1.5k
views
Comment:
C: What to do if more than 78% of genes are differentially expressed according to D
5.4 years ago by
boaty
▴ 220
0
votes
1
reply
1.5k
views
Comment:
C: What to do if more than 78% of genes are differentially expressed according to D
5.4 years ago by
boaty
▴ 220
0
votes
0
replies
1.6k
views
Comment:
C: any idea about histogram(graphic) clustering?
5.5 years ago by
boaty
▴ 220
4
votes
7
replies
1.6k
views
any idea about histogram(graphic) clustering?
RNA-Seq
transcript coverage
updated 5.5 years ago by
Jean-Karim Heriche
27k • written 5.5 years ago by
boaty
▴ 220
0
votes
0
replies
1.6k
views
Comment:
C: any idea about histogram(graphic) clustering?
5.5 years ago by
boaty
▴ 220
0
votes
0
replies
1.6k
views
Comment:
C: any idea about histogram(graphic) clustering?
5.5 years ago by
boaty
▴ 220
0
votes
0
replies
4.0k
views
Comment:
C: Count amino acid in protein sequence in R
5.7 years ago by
boaty
▴ 220
0
votes
0
replies
4.0k
views
Comment:
C: Count amino acid in protein sequence in R
5.7 years ago by
boaty
▴ 220
0
votes
0
replies
4.0k
views
Comment:
C: Count amino acid in protein sequence in R
5.7 years ago by
boaty
▴ 220
9
votes
8
replies
4.0k
views
Count amino acid in protein sequence in R
protein
count
R
updated 5.7 years ago by
zx8754
12k • written 5.7 years ago by
boaty
▴ 220
0
votes
1
reply
4.0k
views
Comment:
C: count amino acid in protein sequence in R
5.7 years ago by
boaty
▴ 220
2
votes
1
reply
1.8k
views
why polyQ are not part of intrisicaly disordered region (IDR) in disopred3 prediction?
protein
disopred
psipred
idr
prediction
5.9 years ago by
boaty
▴ 220
3
votes
0
replies
1.6k
views
Answer:
A: guidance for communication online seach engine with python or R script?
6.0 years ago by
boaty
▴ 220
5
votes
3
replies
1.6k
views
guidance for communication online seach engine with python or R script?
python
RNA-Seq
online search engine
repeatMasker
6.0 years ago by
boaty
▴ 220
1
vote
0
replies
1.6k
views
Comment:
C: guidance for communication online seach engine with python or R script?
6.7 years ago by
boaty
▴ 220
1
vote
0
replies
3.5k
views
Comment:
C: is it meaningless for comparing averages from data with different sample size?
6.7 years ago by
boaty
▴ 220
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