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Comment: C: uploading data in UCSC Microbial genome browser
8.0 years ago by Satyajeet Khare ★ 1.6k
2
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1.7k
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Answer: A: CUFFMERGE from many assemblies to define transcripts but only compare a subset?
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.5k
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Answer: A: sra to fastq conversion - paired-end file won't split
8.0 years ago by Satyajeet Khare ★ 1.6k
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0
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1.8k
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Comment: C: trancriptome analysis using rna-seq data
8.0 years ago by Satyajeet Khare ★ 1.6k
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0
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1.8k
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Answer: A: trancriptome analysis using rna-seq data
8.0 years ago by Satyajeet Khare ★ 1.6k
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11k
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Comment: C: fastq dump error
8.0 years ago by Satyajeet Khare ★ 1.6k
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0
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11k
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Comment: C: fastq dump error
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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0
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11k
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Comment: C: fastq dump error
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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3
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11k
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Comment: C: fastq dump error
8.0 years ago by Satyajeet Khare ★ 1.6k
8
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11
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11k
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fastq dump error
sra fastq-dump sratoolkit
updated 17 months ago by 44k • written 8.0 years ago by ★ 1.6k
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0
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11k
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Comment: C: fastq dump error
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.5k
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Comment: C: Quality check of Medip Seq Data
8.0 years ago by Satyajeet Khare ★ 1.6k
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0
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2.5k
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Answer: A: How to get lncRNA seqences from an annotation file?
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.6k
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Answer: A: Significant genes in RNA-seq
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.5k
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Answer: A: High p-values generated from CuffDiff
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.0k
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Comment: C: Plasmodium berghei Alternative splicing sites ,how to predict if alternative spl
8.0 years ago by Satyajeet Khare ★ 1.6k
1
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1
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2.0k
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Answer: A: Plasmodium berghei Alternative splicing sites ,how to predict if alternative spl
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.2k
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Answer: A: Is it correct to merge bigwig with TPM values from rnaSeq from different biologi
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.2k
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Comment: C: How can I get Nanog PWM
8.0 years ago by Satyajeet Khare ★ 1.6k
4
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2
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2.2k
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Answer: A: How can I get Nanog PWM
8.0 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.5k
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Comment: C: Variable gap motif
8.0 years ago by Satyajeet Khare ★ 1.6k
1
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0
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7.1k
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Answer: A: peaks overlap: ATAC & CHIP seq
updated 8.0 years ago by 6.1k • written 8.0 years ago by ★ 1.6k
1
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2
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2.5k
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Variable gap motif
ChIP-Seq
updated 8.1 years ago by 5.8k • written 8.1 years ago by ★ 1.6k
0
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0
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2.0k
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Answer: A: the difference between human and mouse wiggle files for uploading on UCSC
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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0
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1.9k
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Comment: C: find cancer related methylation in lncRNA though online database
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.7k
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Answer: A: DBMS system for NCBI/Genbank data?
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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1.9k
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Comment: C: Design Primers used to amplify fragment
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.7k
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Answer: A: PCR duplicata and de novo assembly ??
8.1 years ago by Satyajeet Khare ★ 1.6k
2
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1
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2.4k
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Comment: C: error in the location of chromosomes (bam files) - ncRNA ref (alignament tophat)
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.4k
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Comment: C: error in the location of chromosomes (bam files) - ncRNA ref (alignament tophat)
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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1
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2.4k
views
Answer: A: error in the location of chromosomes (bam files) - ncRNA ref (alignament tophat)
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.9k
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Answer: A: downloading many sra files for single cell analysis
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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0
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2.2k
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Answer: A: Cuffdiff promoter.diff is empty
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.8k
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Comment: C: Cuffdiff not performing tss, cds, splicing, promoter or CDS tests
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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3
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2.2k
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Cuffdiff promoter.diff is empty
RNA-Seq Cuffdiff
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.8k
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Comment: C: Cuffdiff not performing tss, cds, splicing, promoter or CDS tests
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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0
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1.8k
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Answer: A: What to merge with cuffmerge?
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.2k
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Comment: C: Cuffdiff promoter.diff is empty
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
reply
6.3k
views
Answer: A: Using not significant differentially expressed genes
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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0
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12k
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Answer: A: cutadapt for trimming reads to specific length
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.1k
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Comment: C: Identification of 3'UTR of a gene not yet discovered in pig
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.1k
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Comment: C: Identification of 3'UTR of a gene not yet discovered in pig
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.3k
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Answer: A: no XLOC gene_id or TCONS transcript_id in fpkm_tracking files
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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7.4k
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Comment: C: TCONS lincRNA ID to ensembl gene ID conversion
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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4.3k
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Answer: A: Differential isoform expression analyses
8.1 years ago by Satyajeet Khare ★ 1.6k
4
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1
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2.8k
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Answer: A: SRA to fastq
8.1 years ago by Satyajeet Khare ★ 1.6k
1
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0
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2.8k
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Comment: C: SRA to fastq
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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5.0k
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Comment: C: what is KI270330.1 or GL000008.2
8.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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5.1k
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Comment: C: Is microarray gene expression analysis is dead ?
8.2 years ago by Satyajeet Khare ★ 1.6k
1
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0
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1.9k
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Comment: C: How to (1) combine two loci into one gene to correct genome and (2) re-run Cuffd
8.2 years ago by Satyajeet Khare ★ 1.6k
283 results • Page 4 of 6
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