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355
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Comment:
Comment: Need some help to develop some python code to analyze kmer data
3 months ago by
schlogl
▴ 160
0
votes
2
replies
355
views
Need some help to develop some python code to analyze kmer data
Python
R
3 months ago by
schlogl
▴ 160
1
vote
0
replies
1.2k
views
Answer:
Answer: How to use efetch to download genome/proteome/etc. at the command line?
7 months ago by
schlogl
▴ 160
0
votes
0
replies
882
views
Comment:
Comment: Counting distance between kmer instances in a sequence
9 months ago by
schlogl
▴ 160
0
votes
0
replies
7.0k
views
Comment:
Comment: Can't locate Bio/SeqIO.pm - path error?
9 months ago by
schlogl
▴ 160
0
votes
0
replies
2.8k
views
Comment:
Comment: Finding 16 mer not present in GRCh38
10 months ago by
schlogl
▴ 160
5
votes
2
replies
882
views
Counting distance between kmer instances in a sequence
kmers
python
inter-distance
R
9 months ago by
schlogl
▴ 160
0
votes
0
replies
377
views
Using jellyfish in a slide window analysis
samtools
jellyfish
slidewindow
10 months ago by
schlogl
▴ 160
0
votes
0
replies
630
views
Comment:
Comment: Using TRF in multiple files
11 months ago by
schlogl
▴ 160
2
votes
3
replies
630
views
Using TRF in multiple files
tandem
TRF
repeats
11 months ago by
schlogl
▴ 160
3
votes
3
replies
1.7k
views
Getting a curl: (22) The requested URL returned error: 500 ERROR
ncbi
updated 14 months ago by
Ram
43k • written 15 months ago by
schlogl
▴ 160
0
votes
0
replies
1.7k
views
Comment:
Comment: Getting a curl: (22) The requested URL returned error: 500 ERROR
15 months ago by
schlogl
▴ 160
0
votes
0
replies
1.7k
views
Comment:
Comment: Getting a curl: (22) The requested URL returned error: 500 ERROR
15 months ago by
schlogl
▴ 160
0
votes
0
replies
4.4k
views
Comment:
Comment: CAI in python: SeqUtils.CodonUsage vs CAI package
15 months ago by
schlogl
▴ 160
1
vote
0
replies
976
views
Comment:
Comment: Alien-hunter outputs
15 months ago by
schlogl
▴ 160
2
votes
4
replies
976
views
Alien-hunter outputs
alien-hunter
15 months ago by
schlogl
▴ 160
1
vote
1
reply
976
views
Answer:
Answer: Alien-hunter outputs
15 months ago by
schlogl
▴ 160
0
votes
0
replies
976
views
Comment:
Comment: Alien-hunter outputs
15 months ago by
schlogl
▴ 160
0
votes
0
replies
550
views
Comment:
Comment: Frequency of a trinucleotide normalized by synonymous codons
16 months ago by
schlogl
▴ 160
2
votes
2
replies
550
views
Frequency of a trinucleotide normalized by synonymous codons
synonymous
codons
16 months ago by
schlogl
▴ 160
1
vote
0
replies
379
views
Statistics for large k-mers with low counts
genomes
k-mers
statistics
20 months ago by
schlogl
▴ 160
1
vote
3
replies
962
views
Looking for a example of using bedtools nuc in many fasta files
bedtools
21 months ago by
schlogl
▴ 160
1
vote
0
replies
962
views
Answer:
Answer: Looking for a example of using bedtools nuc in many fasta files
21 months ago by
schlogl
▴ 160
0
votes
0
replies
962
views
Comment:
Comment: Looking for a example of using bedtools nuc in many fasta files
21 months ago by
schlogl
▴ 160
0
votes
1
reply
1.4k
views
Comment:
Comment: Splitting Gbff files
21 months ago by
schlogl
▴ 160
3
votes
3
replies
1.4k
views
Splitting Gbff files
Gbff
updated 21 months ago by
Istvan Albert
100k • written 21 months ago by
schlogl
▴ 160
0
votes
0
replies
5.0k
views
Comment:
Comment: About calculating the GC content in a sliding window
22 months ago by
schlogl
▴ 160
1
vote
1
reply
1.2k
views
Comment:
Comment: 'Can someone give me a direction on how to draw a figure like this one of dinucl
2.4 years ago by
schlogl
▴ 160
1
vote
0
replies
1.2k
views
Comment:
Comment: Can someone give me a direction on how to draw a figure like this one?
2.4 years ago by
schlogl
▴ 160
11
votes
5
replies
1.2k
views
'Can someone give me a direction on how to draw a figure like this one of dinucleotide frequency distribution pattern of genomes'?
plots
updated 2.4 years ago by
Dunois
★ 2.5k • written 2.4 years ago by
schlogl
▴ 160
0
votes
1
reply
113k
views
Comment:
Comment: Convertion Of Gff3 To Gtf
2.4 years ago by
schlogl
▴ 160
0
votes
0
replies
1.1k
views
Comment:
Comment: Get gene sequence for oragnism using python
2.7 years ago by
schlogl
▴ 160
0
votes
1
reply
1.1k
views
Comment:
Comment: Get gene sequence for oragnism using python
2.7 years ago by
schlogl
▴ 160
1
vote
0
replies
2.8k
views
Comment:
Comment: Finding 16 mer not present in GRCh38
2.8 years ago by
schlogl
▴ 160
0
votes
1
reply
6.0k
views
Comment:
Comment: k-mer finding and counting
2.9 years ago by
schlogl
▴ 160
0
votes
0
replies
1.0k
views
Have a question about run jellyfish in many directories with different number of zipped fasta files
bash
2.9 years ago by
schlogl
▴ 160
0
votes
0
replies
3.6k
views
Comment:
Comment: specific k-mer count in multi fasta file
3.0 years ago by
schlogl
▴ 160
0
votes
1
reply
3.6k
views
Comment:
Comment: specific k-mer count in multi fasta file
3.0 years ago by
schlogl
▴ 160
0
votes
0
replies
1.3k
views
Comment:
Comment: Comparing genomes against randomized genomes
3.0 years ago by
schlogl
▴ 160
0
votes
0
replies
1.3k
views
Comment:
Comment: Comparing genomes against randomized genomes
3.0 years ago by
schlogl
▴ 160
2
votes
6
replies
1.3k
views
Comparing genomes against randomized genomes
sequence
genomes
3.0 years ago by
schlogl
▴ 160
0
votes
0
replies
1.3k
views
Comment:
Comment: Comparing genomes against randomized genomes
3.0 years ago by
schlogl
▴ 160
4
votes
2
replies
669
views
R or Python packages to work with SNPs
snp
updated 3.3 years ago by
aays
▴ 180 • written 3.3 years ago by
schlogl
▴ 160
0
votes
0
replies
885
views
Comment:
C: Programmatically retrieving taxon classification
3.3 years ago by
schlogl
▴ 160
0
votes
0
replies
885
views
Comment:
C: Programmatically retrieving taxon classification
3.3 years ago by
schlogl
▴ 160
6
votes
5
replies
885
views
Programmatically retrieving taxon classification
sequence
updated 3.3 years ago by
hugo.avila
▴ 490 • written 3.3 years ago by
schlogl
▴ 160
0
votes
1
reply
138k
views
Comment:
C: Useful Bash Commands To Handle Fasta Files
3.4 years ago by
schlogl
▴ 160
0
votes
0
replies
1.0k
views
Comment:
C: DNA stadistical studies- Local Base Composition Code
3.7 years ago by
schlogl
▴ 160
0
votes
0
replies
1.0k
views
Comment:
C: DNA stadistical studies- Local Base Composition Code
3.7 years ago by
schlogl
▴ 160
0
votes
1
reply
1.5k
views
Comment:
C: I am trying to select some reference genome region of a bam file, but got an err
3.8 years ago by
schlogl
▴ 160
128 results • Page
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