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85
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Comment: Comment: Checking sex of a sample with sequencing data
4 hours ago by ATpoint 87k
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1
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146
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Comment: Comment: miRNA-seq normalization
7 hours ago by ATpoint 87k
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1
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251
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Comment: Comment: Filter snRNA-seq .fastq files based on barcodes
1 day ago by ATpoint 87k
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1
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214
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Comment: Comment: How to Make Cell Order identical Between Two Seurat Objects in R?
1 day ago by ATpoint 87k
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1
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155
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Comment: Comment: Niormalization process in creating heatmap
1 day ago by ATpoint 87k
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1
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155
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Answer: Answer: Niormalization process in creating heatmap
1 day ago by ATpoint 87k
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1
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160
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Comment: Comment: Remove batch effect RnaSeq (RUVg)
1 day ago by ATpoint 87k
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1
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441
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Comment: Comment: Lacking exons in gtf file of a virus' genome
2 days ago by ATpoint 87k
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1
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294
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Answer: Answer: Perform DEGs with pyDESeq2 in CCLE Melanoma Data But Contains Negative Values
4 days ago by ATpoint 87k
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414
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Answer: Answer: How to align library of highly similar sequences
5 days ago by ATpoint 87k
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0
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267
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Comment: Comment: Mapping reversion mutations
6 days ago by ATpoint 87k
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0
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284
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Comment: Comment: Issue with BSgenomeForge::forgeBSgenomeDataPkgFromNCBI
6 days ago by ATpoint 87k
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445
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Comment: Comment: SlingShot and Subsetting data
6 days ago by ATpoint 87k
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0
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292
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Comment: Comment: Batch effect or biological difference
6 days ago by ATpoint 87k
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1
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325
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Comment: Comment: MAGeCK: Doing two sided test on gene level?
8 days ago by ATpoint 87k
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1
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445
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Comment: Comment: SlingShot and Subsetting data
8 days ago by ATpoint 87k
2
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0
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405
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Comment: Comment: Strange overrepresented sequence
9 days ago by ATpoint 87k
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0
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269
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Comment: Comment: Normalize RNAseq data on RT-dPCR or RT-qPCR
9 days ago by ATpoint 87k
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1
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269
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Comment: Comment: Normalize RNAseq data on RT-dPCR or RT-qPCR
9 days ago by ATpoint 87k
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0
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272
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Comment: Comment: Is there a way to import a large amount of regions of interest into IGV
9 days ago by ATpoint 87k
2
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416
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Comment: Comment: Bioinformatics
9 days ago by ATpoint 87k
2
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1
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403
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Answer: Answer: MarkDuplicates RNASeq: A few samples look weird. What could be the cause?
10 days ago by ATpoint 87k
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2
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432
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Answer: Answer: How to rank genes for GSEA using edgeR-LRT results ?
11 days ago by ATpoint 87k
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0
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268
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Comment: Comment: Choosing the "right" sequence as an input control
12 days ago by ATpoint 87k
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1
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338
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Comment: Comment: Unable to parse config file
12 days ago by ATpoint 87k
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252
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Comment: Comment: TMM normalized CPM
12 days ago by ATpoint 87k
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0
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306
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Comment: Comment: bwa-mem keeps failing to locate the index files
14 days ago by ATpoint 87k
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313
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Comment: Comment: Am I accounting for replicates correctly in pseudobulk analysis?
14 days ago by ATpoint 87k
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1
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258
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Comment: Comment: How many cells are needed in subcluster to draw conclusions?
14 days ago by ATpoint 87k
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1
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313
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Comment: Comment: Am I accounting for replicates correctly in pseudobulk analysis?
14 days ago by ATpoint 87k
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1
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227
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Comment: Comment: How to plot LMER estimate values in heatmap ?
15 days ago by ATpoint 87k
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200
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Answer: Answer: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana
15 days ago by ATpoint 87k
1
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1
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263
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Comment: Comment: CPTAC Data analysis
16 days ago by ATpoint 87k
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0
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209
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Comment: Comment: Detecting Aneuploidy from Bulk RNA-Seq Data
16 days ago by ATpoint 87k
2
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1
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359
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Answer: Answer: Gene Expression Timeline Analysis for N=1
18 days ago by ATpoint 87k
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0
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437
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Comment: Comment: Reasoning - Why is it invalid to compare ratios of TPMs?
19 days ago by ATpoint 87k
2
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0
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318
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Comment: Comment: Alignment algorithm for DNA sequencing
19 days ago by ATpoint 87k
1
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0
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777
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Comment: Comment: Validate RNAseq Models in Microarray Data?
20 days ago by ATpoint 87k
6
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1
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437
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Answer: Answer: Reasoning - Why is it invalid to compare ratios of TPMs?
21 days ago by ATpoint 87k
2
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1
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610
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Comment: Comment: DEGs Analysis For a Microarray Data that has one biological replicates per cell
21 days ago by ATpoint 87k
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271
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Comment: Comment: Alternative normalization strategy for RNA-seq data with global downregulation
22 days ago by ATpoint 87k
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0
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240
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Answer: Answer: Differential Expression Analysis of scRNA seq data with Pseudobulking
22 days ago by ATpoint 87k
2
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0
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344
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Comment: Comment: Advice
23 days ago by ATpoint 87k
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1
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510
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Comment: Comment: DiffBind Normalization ATAC-Seq Question: When to drop a sample?
23 days ago by ATpoint 87k
0
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0
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244
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Answer: Answer: Discrepancy in GEO2R vs. Raw Data Analysis: Significance of DEGs
24 days ago by ATpoint 87k
0
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1
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510
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Answer: Answer: DiffBind Normalization ATAC-Seq Question: When to drop a sample?
24 days ago by ATpoint 87k
0
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1
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297
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Comment: Comment: Sankey plot for unequal node sizes
26 days ago by ATpoint 87k
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0
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236
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Comment: Comment: Can DiffBind Perform Peak Calling and Differential Analysis Directly from BAM Fi
26 days ago by ATpoint 87k
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0
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248
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Comment: Comment: Filtering tidySummarizedExperiment by seqnames does not work as expected
28 days ago by ATpoint 87k
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1
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340
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Comment: Comment: Comparability between normalized Counts / TPMs and log2FoldChange
29 days ago by ATpoint 87k
10,230 results • Page 1 of 205
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