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Comment: Comment: Questions about transfering wgs file to reference genome file
8 months ago by ATpoint 86k
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1
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1.4k
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Comment: Comment: RNAseq of primary tumor and metastases in two different organ
8 months ago by ATpoint 86k
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547
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Comment: Comment: Questions about transfering wgs file to reference genome file
8 months ago by ATpoint 86k
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2.8k
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Comment: Comment: Shannon vs Simpson for TCR diversity estimation
8 months ago by ATpoint 86k
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1
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865
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
8 months ago by ATpoint 86k
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305
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Answer: Answer: Shared pathways up in disease blood and tissue relative to healthy blood (scRNA-
8 months ago by ATpoint 86k
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1
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1.9k
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Comment: Comment: ¿How I know if it is a batch effect or are real differences between my controls
8 months ago by ATpoint 86k
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601
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Comment: Comment: lncRNA from TCGA
8 months ago by ATpoint 86k
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1
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707
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Comment: Comment: WGCNA website
8 months ago by ATpoint 86k
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0
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544
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Comment: Comment: TMM normalization with DESeq2
8 months ago by ATpoint 86k
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544
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Answer: Answer: TMM normalization with DESeq2
updated 8 months ago by 44k • written 8 months ago by 86k
1
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0
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523
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Comment: Comment: Batch effect issue in RNA velocity analysis
8 months ago by ATpoint 86k
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1
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776
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Comment: Comment: Single cell analysis with "meta".tsv.gz file
8 months ago by ATpoint 86k
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751
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Comment: Comment: Homer giving troubles
8 months ago by ATpoint 86k
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2
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520
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Comment: Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
8 months ago by ATpoint 86k
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0
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588
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Comment: Comment: can't download and use mageck-vispr for R?
8 months ago by ATpoint 86k
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0
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638
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Answer: Answer: Can't download txdbmaker package
8 months ago by ATpoint 86k
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0
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1.9k
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Comment: Comment: Installing Cell Ranger
8 months ago by ATpoint 86k
1
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0
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431
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Comment: Comment: What are crucial apps/ scripts for cancer genome/data analysis that can be set
8 months ago by ATpoint 86k
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1
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588
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Comment: Comment: Removing batch effect using combat-seq
8 months ago by ATpoint 86k
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1
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1.9k
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Comment: Comment: Installing Cell Ranger
8 months ago by ATpoint 86k
1
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1
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588
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Comment: Comment: Removing batch effect using combat-seq
8 months ago by ATpoint 86k
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2
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751
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Answer: Answer: Homer giving troubles
8 months ago by ATpoint 86k
4
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482
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Answer: Answer: Seeking Proper Interpretation of Dispersion Graph: A Call for Statistical and Bi
8 months ago by ATpoint 86k
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0
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710
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Comment: Comment: Problem generating paired end reads when converting Cell Ranger's BAM result to
8 months ago by ATpoint 86k
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0
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472
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Answer: Answer: How to calculate depth of coverage and applying read depth filter
8 months ago by ATpoint 86k
2
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1
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710
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Answer: Answer: Problem generating paired end reads when converting Cell Ranger's BAM result to
8 months ago by ATpoint 86k
3
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1
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440
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Comment: Comment: Gene reads all zero for each sample
9 months ago by ATpoint 86k
1
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0
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545
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Comment: Comment: Flow Cytometry Data Analysis by Seurat
9 months ago by ATpoint 86k
3
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1
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605
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Comment: Comment: Volcano Plot Output Inquiry: Graphs Facing Down
9 months ago by ATpoint 86k
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1
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13k
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Comment: Comment: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
9 months ago by ATpoint 86k
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1
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1.1k
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Comment: Comment: Piping samtools to R
9 months ago by ATpoint 86k
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1
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1.1k
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Comment: Comment: Piping samtools to R
9 months ago by ATpoint 86k
1
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1
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406
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Comment: Comment: Error with goodSamplesGenes()
9 months ago by ATpoint 86k
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1
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611
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Answer: Answer: Limma compare between 3 conditions vs 2 conditions
9 months ago by ATpoint 86k
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1
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798
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Comment: Comment: Salmon Quantification in Alignment based-mode
9 months ago by ATpoint 86k
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2
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463
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Comment: Comment: High number of detected genes per cell after doublet removal - scRNAseq data
9 months ago by ATpoint 86k
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1
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422
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Comment: Comment: Cell communacations analysis. I only have the proteome of one type of cell
9 months ago by ATpoint 86k
1
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1
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410
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Comment: Comment: Is it possible to see so little adipocyte in white adipose tissue?
updated 9 months ago by 44k • written 9 months ago by 86k
1
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0
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423
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Comment: Comment: Deseq generating warning "the model matrix is not full rank"
9 months ago by ATpoint 86k
0
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1
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495
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Answer: Answer: Using velocyto on 3'UTR 10x single-cell RNA-Seq data
9 months ago by ATpoint 86k
0
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1
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664
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Comment: Comment: how to run limma for large datasets
9 months ago by ATpoint 86k
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0
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966
views
Answer: Answer: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
9 months ago by ATpoint 86k
1
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1
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784
views
Comment: Comment: Quest about the input data for PCA analysis
9 months ago by ATpoint 86k
0
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0
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335
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Comment: Comment: Adding gene to GRange objects with single base
9 months ago by ATpoint 86k
2
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0
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383
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Comment: Comment: Disease Prevalence Database/Disease Incidence Database
9 months ago by ATpoint 86k
2
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1
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507
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Answer: Answer: How to visualize scRNA-seq normalized data
9 months ago by ATpoint 86k
2
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1
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411
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Answer: Answer: Infering the cell composition from bulk RNA-seq data for mouse
9 months ago by ATpoint 86k
0
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1
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450
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Answer: Answer: Gene set to perform GSVA
9 months ago by ATpoint 86k
1
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1
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526
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Answer: Answer: Length by gene from salmon
9 months ago by ATpoint 86k
10,074 results • Page 10 of 202
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