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Comment:
Comment: labelling the clusters from the CD4 T cell scRNAseq data
13 months ago by
ATpoint
86k
0
votes
1
reply
688
views
Comment:
Comment: Analyze with Geo2R
13 months ago by
ATpoint
86k
3
votes
0
replies
1.3k
views
Comment:
Comment: Current Trends in Bioinformatics
13 months ago by
ATpoint
86k
0
votes
1
reply
631
views
Comment:
Comment: Find Genes in Homer Analysis that have the enriched Motif
13 months ago by
ATpoint
86k
0
votes
0
replies
3.8k
views
Comment:
Comment: PCAtools data file not linking to metadata file
13 months ago by
ATpoint
86k
1
vote
0
replies
525
views
Comment:
Comment: DOES MGI SEQUENCING RESULT CONTAINS MULTIPLE FILES FOR SINGLE SAMPLE
13 months ago by
ATpoint
86k
0
votes
1
reply
1.2k
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Answer:
Answer: Use of IDR after running MACS3 for ATAC-seq data
13 months ago by
ATpoint
86k
0
votes
1
reply
1.2k
views
Comment:
Comment: Working with NCBI downloadable Datasets
13 months ago by
ATpoint
86k
4
votes
1
reply
743
views
Answer:
Answer: What is Bowtie2 --norc parameter?
13 months ago by
ATpoint
86k
1
vote
1
reply
688
views
Comment:
Comment: Analyze with Geo2R
13 months ago by
ATpoint
86k
2
votes
1
reply
1.2k
views
Comment:
Comment: Working with NCBI downloadable Datasets
13 months ago by
ATpoint
86k
2
votes
0
replies
1.1k
views
Answer:
Answer: Find all locations of aligned reads with MQ (Mapping Quality) = 0.
13 months ago by
ATpoint
86k
2
votes
0
replies
936
views
Comment:
Comment: Is there a good software to generate test genomics data?
13 months ago by
ATpoint
86k
1
vote
0
replies
552
views
Comment:
Comment: t-test by row
13 months ago by
ATpoint
86k
0
votes
0
replies
1.3k
views
Comment:
Comment: STAR alignment speed
13 months ago by
ATpoint
86k
0
votes
0
replies
691
views
Comment:
Comment: Deseq2 5 level condition - building contrast
13 months ago by
ATpoint
86k
1
vote
1
reply
691
views
Comment:
Comment: Deseq2 5 level condition - building contrast
13 months ago by
ATpoint
86k
0
votes
0
replies
1.7k
views
Comment:
Comment: I am new and just started working on my first bioinformatics project. But idk i
13 months ago by
ATpoint
86k
1
vote
1
reply
951
views
Comment:
Comment: Unexpected separation of RNA-seq samples on PCA plot
13 months ago by
ATpoint
86k
2
votes
0
replies
1.3k
views
Answer:
Answer: STAR alignment speed
13 months ago by
ATpoint
86k
2
votes
1
reply
1.6k
views
Answer:
Answer: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
13 months ago by
ATpoint
86k
0
votes
0
replies
631
views
Comment:
Comment: how to fix low RNA input in bulk RNAseq data analysis?
13 months ago by
ATpoint
86k
0
votes
1
reply
612
views
Comment:
Comment: How to remove batch effect in RNA-seq using control samples?
13 months ago by
ATpoint
86k
0
votes
0
replies
396
views
Comment:
Comment: Seeking Advice on Validating RNA-Seq Data Before Differential Analysis
13 months ago by
ATpoint
86k
1
vote
0
replies
523
views
Comment:
Comment: Model matrix confront 2 groups out of 3
13 months ago by
ATpoint
86k
6
votes
0
replies
731
views
Answer:
Answer: Batch effect correction between Bulk RNA-Seq and scRNA-Seq's clusters
13 months ago by
ATpoint
86k
0
votes
1
reply
1.0k
views
Comment:
Comment: Efficient Bulk Data Retrieval from NCBI BioProject
13 months ago by
ATpoint
86k
1
vote
1
reply
1.2k
views
Comment:
Comment: Downstream analysis with DEseq2 normalization
13 months ago by
ATpoint
86k
4
votes
1
reply
653
views
Answer:
Answer: Normalization function in DEseq2
13 months ago by
ATpoint
86k
1
vote
1
reply
2.8k
views
Comment:
Comment: How to download FASTQ files from the European Nucleotide Archive (ENA) to use th
13 months ago by
ATpoint
86k
0
votes
1
reply
1.0k
views
Comment:
Comment: Calculation of ChIP-seq normalization factors with non-conventional spike-in ass
13 months ago by
ATpoint
86k
4
votes
1
reply
2.8k
views
Answer:
Answer: How to download FASTQ files from the European Nucleotide Archive (ENA) to use th
13 months ago by
ATpoint
86k
0
votes
0
replies
699
views
Comment:
Comment: filtering lowly expressed exons
13 months ago by
ATpoint
86k
1
vote
1
reply
1.0k
views
Comment:
Comment: Cut fastq files
13 months ago by
ATpoint
86k
0
votes
1
reply
1.8k
views
Comment:
Comment: Mitochondrial genes - TPM calculation bulk RNA-Seq
13 months ago by
ATpoint
86k
0
votes
1
reply
944
views
Answer:
Answer: Bowtie2 Local Alignment Not Working
13 months ago by
ATpoint
86k
0
votes
1
reply
1.0k
views
Comment:
Comment: Htseq-count reads with missing mate encountered
13 months ago by
ATpoint
86k
1
vote
1
reply
1.8k
views
Comment:
Comment: Mitochondrial genes - TPM calculation bulk RNA-Seq
13 months ago by
ATpoint
86k
0
votes
0
replies
604
views
Comment:
Comment: accessing the gene on fastq data
13 months ago by
ATpoint
86k
0
votes
1
reply
1.8k
views
Comment:
Comment: Mitochondrial genes - TPM calculation bulk RNA-Seq
13 months ago by
ATpoint
86k
1
vote
1
reply
1.2k
views
Comment:
Comment: Quality filtering prior to pseudoalignment
13 months ago by
ATpoint
86k
0
votes
0
replies
1.6k
views
Comment:
Comment: IGV not showing bigwig track information
13 months ago by
ATpoint
86k
0
votes
1
reply
699
views
Comment:
Comment: filtering lowly expressed exons
13 months ago by
ATpoint
86k
2
votes
0
replies
979
views
Comment:
Comment: Selecting a subset of MSigDB database for GSEA
13 months ago by
ATpoint
86k
1
vote
1
reply
1.2k
views
Comment:
Comment: DESEQ2 design in DESeqDataSetFromMatrix: cell and treatment
13 months ago by
ATpoint
86k
0
votes
1
reply
1.2k
views
Comment:
Comment: DESEQ2 design in DESeqDataSetFromMatrix: cell and treatment
13 months ago by
ATpoint
86k
1
vote
1
reply
1.6k
views
Comment:
Comment: IGV not showing bigwig track information
13 months ago by
ATpoint
86k
0
votes
0
replies
1.3k
views
Comment:
Comment: anRichment is missing
13 months ago by
ATpoint
86k
1
vote
1
reply
765
views
Comment:
Comment: bwa-mem2 error: skip or orientatioon FF
13 months ago by
ATpoint
86k
1
vote
1
reply
1.6k
views
Comment:
Comment: IGV not showing bigwig track information
13 months ago by
ATpoint
86k
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