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Comment:
Comment: PCA in two similar conditions
5 weeks ago by
ATpoint
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Comment:
Comment: PCA in two similar conditions
5 weeks ago by
ATpoint
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Comment:
Comment: PCR Primer Design
5 weeks ago by
ATpoint
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Comment:
Comment: PCR Primer Design
5 weeks ago by
ATpoint
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240
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Comment:
Comment: GPU facility for single cell multi omics data analysis
5 weeks ago by
ATpoint
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547
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Comment:
Comment: Batch correction
5 weeks ago by
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Comment:
Comment: Batch correction
5 weeks ago by
ATpoint
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Answer:
Answer: Where can I download a BED file with exonic regions?
5 weeks ago by
ATpoint
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376
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Comment:
Comment: PCA plot
5 weeks ago by
ATpoint
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620
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Answer:
Answer: Pre-pseudoalignment preprocessing
6 weeks ago by
ATpoint
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767
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Answer:
Answer: Are there any preferred trajectory/pseudotime analyses that do not require an ar
6 weeks ago by
ATpoint
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656
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Comment:
Comment: Compare Two Sigle-cell Sample for Differentially Expressed Genes (DEGs). How?
7 weeks ago by
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Answer:
Answer: Compare Two Sigle-cell Sample for Differentially Expressed Genes (DEGs). How?
7 weeks ago by
ATpoint
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Answer:
Answer: SCE object acting strangley
7 weeks ago by
ATpoint
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Comment:
Comment: Finding Differential Phosphosites in TMT Phosphoproteomics Data
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Comment: Dealing with outliers for differential expression in proteomics
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Comment:
Comment: statistical testing for MS/MS proteomics bulk samples
7 weeks ago by
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538
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Comment:
Comment: Why higher read counts in chromosome M/MT
8 weeks ago by
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645
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Comment:
Comment: Uneven raw read counts per sample for ATAC-Seq differential analysis
8 weeks ago by
ATpoint
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645
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Comment:
Comment: Uneven raw read counts per sample for ATAC-Seq differential analysis
8 weeks ago by
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390
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Answer:
Answer: How can I identify inflammatory genes from the Molecular signature database?
8 weeks ago by
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582
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Comment:
Comment: Differential expression analysis between groups with varying cell proportions
8 weeks ago by
ATpoint
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5.4k
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Comment:
Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
8 weeks ago by
ATpoint
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294
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Comment:
Comment: Highly skewed distribution of differentially expressed (DE) genes
8 weeks ago by
ATpoint
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2.0k
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Comment:
Comment: gdc-client command line error
8 weeks ago by
ATpoint
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0
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582
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Comment:
Comment: Differential expression analysis between groups with varying cell proportions
8 weeks ago by
ATpoint
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582
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Comment:
Comment: Differential expression analysis between groups with varying cell proportions
8 weeks ago by
ATpoint
86k
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5.4k
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Comment:
Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
8 weeks ago by
ATpoint
86k
2
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0
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309
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Answer:
Answer: RNA-seq heatmaps: effective length, RPKM vs. CPM
8 weeks ago by
ATpoint
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3
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300
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Answer:
Answer: Downloading Raw Reads
8 weeks ago by
ATpoint
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315
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Comment:
Comment: Problem in calling peak by MACS3
8 weeks ago by
ATpoint
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674
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Comment:
Comment: How to handle RNA seq data with unbalanced % rRNA by group?
8 weeks ago by
ATpoint
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1.2k
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Comment:
Comment: How to determine whether it is 10x data
8 weeks ago by
ATpoint
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250
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Comment:
Comment: Raw reads or raw counts for meta-analysis
8 weeks ago by
ATpoint
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579
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Comment:
Comment: Problem with mapping rate while using Mageck to process CRISPR screen data
8 weeks ago by
ATpoint
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5.4k
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Comment:
Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
8 weeks ago by
ATpoint
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2
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631
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Answer:
Answer: GEOquery issue
8 weeks ago by
ATpoint
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210
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Comment:
Comment: Can VST be called Log2 expression in a paper?
9 weeks ago by
ATpoint
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453
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Comment:
Comment: 0-based or 1-based file format using R pipeline?
9 weeks ago by
ATpoint
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674
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Comment:
Comment: How to handle RNA seq data with unbalanced % rRNA by group?
9 weeks ago by
ATpoint
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836
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Comment:
Comment: Does mageck-vispr calculate differently than mageck?
9 weeks ago by
ATpoint
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836
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Comment:
Comment: Does mageck-vispr calculate differently than mageck?
9 weeks ago by
ATpoint
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2
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1
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691
views
Answer:
Answer: why do I get this error while reading single cell RNA seq data in R
9 weeks ago by
ATpoint
86k
1
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1
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405
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Answer:
Answer: Unexpected High T-Base Content in scRNA-seq Fastq Files and GC Bias Correction
9 weeks ago by
ATpoint
86k
0
votes
0
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641
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Comment:
Comment: batch correction limma package (bead based assay data)
9 weeks ago by
ATpoint
86k
0
votes
0
replies
584
views
Comment:
Comment: How to use lme4() to perform differential expression on bulk RNA seq data with m
10 weeks ago by
ATpoint
86k
0
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0
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447
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Answer:
Answer: Questions Regarding Normalization and Standardization in RNA-seq Differential An
10 weeks ago by
ATpoint
86k
0
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0
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363
views
Comment:
Comment: all genes have negative logFC edgeR
10 weeks ago by
ATpoint
86k
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1
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641
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Answer:
Answer: batch correction limma package (bead based assay data)
10 weeks ago by
ATpoint
86k
2
votes
1
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743
views
Answer:
Answer: WGCNA package.
10 weeks ago by
ATpoint
86k
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