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Comment: Comment: Normalize RNAseq data on RT-dPCR or RT-qPCR
12 weeks ago by ATpoint 88k
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457
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Comment: Comment: Is there a way to import a large amount of regions of interest into IGV
12 weeks ago by ATpoint 88k
2
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0
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642
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Comment: Comment: Bioinformatics
12 weeks ago by ATpoint 88k
2
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1
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678
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Answer: Answer: MarkDuplicates RNASeq: A few samples look weird. What could be the cause?
12 weeks ago by ATpoint 88k
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2
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795
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Answer: Answer: How to rank genes for GSEA using edgeR-LRT results ?
12 weeks ago by ATpoint 88k
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0
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420
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Comment: Comment: Choosing the "right" sequence as an input control
12 weeks ago by ATpoint 88k
1
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1
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647
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Comment: Comment: Unable to parse config file
12 weeks ago by ATpoint 88k
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0
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393
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Comment: Comment: TMM normalized CPM
12 weeks ago by ATpoint 88k
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650
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Comment: Comment: bwa-mem keeps failing to locate the index files
12 weeks ago by ATpoint 88k
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444
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Comment: Comment: Am I accounting for replicates correctly in pseudobulk analysis?
12 weeks ago by ATpoint 88k
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1
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444
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Comment: Comment: How many cells are needed in subcluster to draw conclusions?
12 weeks ago by ATpoint 88k
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1
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444
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Comment: Comment: Am I accounting for replicates correctly in pseudobulk analysis?
12 weeks ago by ATpoint 88k
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1
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345
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Comment: Comment: How to plot LMER estimate values in heatmap ?
3 months ago by ATpoint 88k
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0
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367
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Answer: Answer: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana
3 months ago by ATpoint 88k
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1
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460
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Comment: Comment: CPTAC Data analysis
3 months ago by ATpoint 88k
1
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0
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302
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Comment: Comment: Detecting Aneuploidy from Bulk RNA-Seq Data
3 months ago by ATpoint 88k
2
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1
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592
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Answer: Answer: Gene Expression Timeline Analysis for N=1
3 months ago by ATpoint 88k
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716
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Comment: Comment: Reasoning - Why is it invalid to compare ratios of TPMs?
3 months ago by ATpoint 88k
2
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0
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488
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Comment: Comment: Alignment algorithm for DNA sequencing
3 months ago by ATpoint 88k
1
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0
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971
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Comment: Comment: Validate RNAseq Models in Microarray Data?
3 months ago by ATpoint 88k
6
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1
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716
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Answer: Answer: Reasoning - Why is it invalid to compare ratios of TPMs?
3 months ago by ATpoint 88k
2
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1
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751
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Comment: Comment: DEGs Analysis For a Microarray Data that has one biological replicates per cell
3 months ago by ATpoint 88k
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0
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346
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Comment: Comment: Alternative normalization strategy for RNA-seq data with global downregulation
3 months ago by ATpoint 88k
0
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0
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448
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Answer: Answer: Differential Expression Analysis of scRNA seq data with Pseudobulking
3 months ago by ATpoint 88k
2
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0
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510
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Comment: Comment: Advice
3 months ago by ATpoint 88k
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1
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732
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Comment: Comment: DiffBind Normalization ATAC-Seq Question: When to drop a sample?
3 months ago by ATpoint 88k
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0
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463
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Answer: Answer: Discrepancy in GEO2R vs. Raw Data Analysis: Significance of DEGs
3 months ago by ATpoint 88k
0
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1
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732
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Answer: Answer: DiffBind Normalization ATAC-Seq Question: When to drop a sample?
3 months ago by ATpoint 88k
0
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1
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485
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Comment: Comment: Sankey plot for unequal node sizes
3 months ago by ATpoint 88k
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0
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321
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Comment: Comment: Can DiffBind Perform Peak Calling and Differential Analysis Directly from BAM Fi
3 months ago by ATpoint 88k
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0
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329
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Comment: Comment: Filtering tidySummarizedExperiment by seqnames does not work as expected
3 months ago by ATpoint 88k
0
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1
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504
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Comment: Comment: Comparability between normalized Counts / TPMs and log2FoldChange
3 months ago by ATpoint 88k
1
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1
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504
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Comment: Comment: Comparability between normalized Counts / TPMs and log2FoldChange
3 months ago by ATpoint 88k
1
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0
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548
views
Comment: Comment: suggestion for alternative splicing event detecting tools under two biological c
3 months ago by ATpoint 88k
0
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1
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504
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Comment: Comment: Comparability between normalized Counts / TPMs and log2FoldChange
3 months ago by ATpoint 88k
3
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1
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1.2k
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Answer: Answer: What is the current state of the beef against UMAP/tSNE in the context of sc tra
3 months ago by ATpoint 88k
2
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1
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709
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Answer: Answer: Assigning cell annotation based on calculated scores.
3 months ago by ATpoint 88k
0
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0
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411
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Comment: Comment: Where to find WGS, metagenome data for obesity group?
3 months ago by ATpoint 88k
0
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1
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486
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Comment: Comment: Normalizing Peaks in ChIP seq
3 months ago by ATpoint 88k
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0
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244
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Comment: Comment: Edit Dataset FASTQ files using ReadStore Command Line Interface
3 months ago by ATpoint 88k
3
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1
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412
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Answer: Answer: Optimal Computer Configuration for Bioinformatics Analysis
3 months ago by ATpoint 88k
0
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0
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229
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Comment: Comment: All VS All contamination check for tumor samples
3 months ago by ATpoint 88k
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1
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345
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Comment: Comment: Query on WES
3 months ago by ATpoint 88k
1
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1
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313
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Comment: Comment: Determine binding sites in unstimulated TF ChIP-seq samples
3 months ago by ATpoint 88k
0
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0
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739
views
Comment: Comment: Should we cite sed / awk in papers?
3 months ago by ATpoint 88k
1
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1
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677
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Answer: Answer: Installing ggpubr in Docker container rocker/r-base??
3 months ago by ATpoint 88k
2
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1
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739
views
Answer: Answer: Should we cite sed / awk in papers?
3 months ago by ATpoint 88k
0
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0
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317
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Comment: Comment: Enrichment Analysis for cCREs
3 months ago by ATpoint 88k
1
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1
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545
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Comment: Comment: Cell Type annotation showing Normal cells as Cancer cells in single cell analysi
3 months ago by ATpoint 88k
2
votes
1
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744
views
Comment: Comment: Differential Expression and absolute expression
3 months ago by ATpoint 88k
10,309 results • Page 3 of 207
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