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Comment:
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
7 months ago by
ATpoint
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674
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Comment:
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
7 months ago by
ATpoint
86k
1
vote
0
replies
371
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Answer:
Answer: geom_bar issue in ggplot2 with xlim()
7 months ago by
ATpoint
86k
1
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1
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548
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Answer:
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
7 months ago by
ATpoint
86k
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360
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Comment:
Comment: Broad and Narrow peaks
7 months ago by
ATpoint
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1
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471
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Comment:
Comment: How can I calculate the OS of each patient?
7 months ago by
ATpoint
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870
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Comment:
Comment: Can I perform a correlation test with 3 biological replicates per condition?
7 months ago by
ATpoint
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870
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Answer:
Answer: Can I perform a correlation test with 3 biological replicates per condition?
7 months ago by
ATpoint
86k
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1
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870
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Comment:
Comment: Can I perform a correlation test with 3 biological replicates per condition?
7 months ago by
ATpoint
86k
2
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1
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1.9k
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
7 months ago by
ATpoint
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0
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664
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Comment:
Comment: Would you bother re-mapping RNA-seq data from an old GRCh38 build to a newer ver
7 months ago by
ATpoint
86k
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0
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1.9k
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
7 months ago by
ATpoint
86k
0
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0
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852
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Comment:
Comment: Details on salmon index
7 months ago by
ATpoint
86k
1
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2
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1.9k
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Answer:
Answer: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
7 months ago by
ATpoint
86k
0
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0
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798
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Comment:
Comment: Getting differential ChIP-seq peaks between conditions after calling consensus p
7 months ago by
ATpoint
86k
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1
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1.9k
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Comment:
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
7 months ago by
ATpoint
86k
3
votes
2
replies
798
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Answer:
Answer: Getting differential ChIP-seq peaks between conditions after calling consensus p
7 months ago by
ATpoint
86k
0
votes
0
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496
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Comment:
Comment: RNAseq RNA content
7 months ago by
ATpoint
86k
1
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2
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1.2k
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Comment:
Comment: Overlapping Ranges within Granges object
7 months ago by
ATpoint
86k
1
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0
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268
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Comment:
Comment: sci-RNA-seq
7 months ago by
ATpoint
86k
0
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1
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1.2k
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Answer:
Answer: Overlapping Ranges within Granges object
7 months ago by
ATpoint
86k
0
votes
0
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954
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Comment:
Comment: BWA alignment
7 months ago by
ATpoint
86k
0
votes
1
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449
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Answer:
Answer: Inquiry about deseq2 transformation
7 months ago by
ATpoint
86k
1
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0
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327
views
Answer:
Answer: The total expressed genes in RNA-Seq data
7 months ago by
ATpoint
86k
3
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0
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326
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Answer:
Answer: What is the bin size for Bamcompare?
7 months ago by
ATpoint
86k
0
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1
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954
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Comment:
Comment: BWA alignment
7 months ago by
ATpoint
86k
2
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0
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481
views
Comment:
Comment: Publish a Letter in higher impact vs Research article in lower impact
7 months ago by
ATpoint
86k
1
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1
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700
views
Comment:
Comment: How to remove multiple batch effects from RNA-seq data before limma differential
7 months ago by
ATpoint
86k
1
vote
0
replies
1.0k
views
Comment:
Comment: Tissue-specific DEG analysis with DEseq2
7 months ago by
ATpoint
86k
2
votes
1
reply
899
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Answer:
Answer: error in fun(x((i)), ...) : only defined on a data frame with all numeric alike
7 months ago by
ATpoint
86k
1
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0
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457
views
Answer:
Answer: DESeq2 error
7 months ago by
ATpoint
86k
0
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0
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356
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Comment:
Comment: When should I use R-MarkDown over R-Script ?
7 months ago by
ATpoint
86k
0
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1
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416
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Comment:
Comment: LncRNA Nomenclature
7 months ago by
ATpoint
86k
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1
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754
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Answer:
Answer: How to convert normalized BigWig file to count matrix?
7 months ago by
ATpoint
86k
1
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1
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814
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Comment:
Comment: Importing a fastq file
7 months ago by
ATpoint
86k
0
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0
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956
views
Comment:
Comment: RNA seq analysis
7 months ago by
ATpoint
86k
1
vote
1
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1.3k
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Answer:
Answer: How do I change the title font size in ViolinPlot (Seurat)
7 months ago by
ATpoint
86k
0
votes
0
replies
445
views
Comment:
Comment: Exploring Diet Effects in Single-Cell RNA Sequencing
7 months ago by
ATpoint
86k
0
votes
1
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656
views
Comment:
Comment: A question about reference genome for creating the consensus sequence
7 months ago by
ATpoint
86k
0
votes
1
reply
656
views
Answer:
Answer: A question about reference genome for creating the consensus sequence
7 months ago by
ATpoint
86k
1
vote
1
reply
367
views
Comment:
Comment: Repeated testing/data mining in RNA Seq
7 months ago by
ATpoint
86k
0
votes
0
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469
views
Comment:
Comment: Differentail gene expression results
7 months ago by
ATpoint
86k
1
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0
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281
views
Comment:
Comment: student
7 months ago by
ATpoint
86k
2
votes
0
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405
views
Answer:
Answer: What is the proper way to identify the cell types of scRNAseq cluster?
7 months ago by
ATpoint
86k
1
vote
0
replies
453
views
Comment:
Comment: error in R code
7 months ago by
ATpoint
86k
2
votes
1
reply
1.0k
views
Answer:
Answer: Tissue-specific DEG analysis with DEseq2
7 months ago by
ATpoint
86k
0
votes
0
replies
663
views
Answer:
Answer: install.packages("imudata")
7 months ago by
ATpoint
86k
0
votes
1
reply
421
views
Comment:
Comment: creating batch colum for batch correction
7 months ago by
ATpoint
86k
0
votes
1
reply
855
views
Comment:
Comment: Differential Expression Analysis using DESeq2 in R
7 months ago by
ATpoint
86k
1
vote
0
replies
1.3k
views
Comment:
Comment: Generating mpileup file using samtools
7 months ago by
ATpoint
86k
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