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1
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4
replies
5.4k
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C to T Transition Mechanism
sequencing genome
updated 4.5 years ago by 20 • written 8.5 years ago by ▴ 130
6
votes
9
replies
14k
views
Converting Illumina fastq quality scores to phred
sequencing
updated 5.0 years ago by ▴ 120 • written 8.2 years ago by ▴ 130
0
votes
0
replies
1.1k
views
Comment: C: dNdScv Zero coding substitutions found in this dataset.
5.2 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
1.1k
views
Comment: C: dNdScv Zero coding substitutions found in this dataset.
5.2 years ago by L. A. Liggett ▴ 130
0
votes
3
replies
1.1k
views
dNdScv Zero coding substitutions found in this dataset.
software error
updated 5.2 years ago by ▴ 220 • written 5.2 years ago by ▴ 130
0
votes
1
reply
1.9k
views
Comment: C: Convert mouse amino acid location to genomic location
5.6 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
1.9k
views
Comment: C: Convert mouse amino acid location to genomic location
5.6 years ago by L. A. Liggett ▴ 130
9
votes
9
replies
1.9k
views
Convert mouse amino acid location to genomic location
genome gene
5.6 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
1.9k
views
Comment: C: Convert mouse amino acid location to genomic location
5.6 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
663
views
Separate Genome into Tiers
genome
6.3 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
1.7k
views
Comment: C: How to get orthologous sequence
6.4 years ago by L. A. Liggett ▴ 130
1
vote
7
replies
1.7k
views
How to get orthologous sequence
genome gene
updated 6.4 years ago by 15k • written 6.4 years ago by ▴ 130
0
votes
0
replies
1.7k
views
Comment: C: How to get orthologous sequence
6.4 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
1.7k
views
Comment: C: How to get orthologous sequence
6.4 years ago by L. A. Liggett ▴ 130
7
votes
4
replies
6.3k
views
Get gene names from ensembl ID or gene region
RNA-Seq Ensembl Python
updated 6.4 years ago by 36k • written 6.4 years ago by ▴ 130
1
vote
7
replies
1.7k
views
Label fastq reads
alignment sequencing
updated 6.7 years ago by 14k • written 6.7 years ago by ▴ 130
0
votes
1
reply
1.7k
views
Comment: C: Label fastq reads
6.7 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
1.7k
views
Comment: C: Label fastq reads
6.7 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
2.4k
views
Comment: C: Samtools faidx non-zero exit status 217
6.8 years ago by L. A. Liggett ▴ 130
2
votes
3
replies
2.4k
views
Samtools faidx non-zero exit status 217
sequence
6.8 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
1.4k
views
Comment: C: Determining off-target oligo binding potential
6.9 years ago by L. A. Liggett ▴ 130
0
votes
4
replies
1.4k
views
Determining off-target oligo binding potential
sequence genome sequencing
6.9 years ago by L. A. Liggett ▴ 130
4
votes
1
reply
5.4k
views
primer3-py Heterodimer Calculations
sequencing sequence
updated 6.9 years ago by ▴ 740 • written 6.9 years ago by ▴ 130
1
vote
3
replies
2.8k
views
Use vcf files for dN/dS calculations
sequencing
updated 16 months ago by ▴ 920 • written 7.1 years ago by ▴ 130
0
votes
0
replies
1.9k
views
Comment: C: Finding a variant's flanking sequence
7.2 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
1.9k
views
Comment: C: Finding a variant's flanking sequence
7.2 years ago by L. A. Liggett ▴ 130
4
votes
4
replies
1.9k
views
Finding a variant's flanking sequence
sequence sequencing
updated 7.2 years ago by 22k • written 7.2 years ago by ▴ 130
0
votes
4
replies
2.4k
views
Derive Consensus Read from pairwise2 alignment
alignment
updated 7.5 years ago by ▴ 320 • written 8.0 years ago by ▴ 130
0
votes
1
reply
2.2k
views
Comment: C: Lack of early variants
7.6 years ago by L. A. Liggett ▴ 130
2
votes
10
replies
2.2k
views
Lack of early variants
sequencing
updated 7.6 years ago by ★ 5.0k • written 7.6 years ago by ▴ 130
0
votes
1
reply
2.2k
views
Comment: C: Lack of early variants
7.6 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
2.2k
views
Comment: C: Lack of early variants
7.6 years ago by L. A. Liggett ▴ 130
1
vote
0
replies
2.2k
views
Comment: C: Lack of early variants
7.6 years ago by L. A. Liggett ▴ 130
3
votes
2
replies
1.8k
views
Reverse Complement Human Genome Reference
sequencing
7.6 years ago by L. A. Liggett ▴ 130
1
vote
0
replies
2.0k
views
Freebayes is slow and maybe inaccurate when processing a single aligned read
sequencing variant calling
7.8 years ago by L. A. Liggett ▴ 130
2
votes
0
replies
1.7k
views
Creating test vcf files
sequencing
7.8 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
2.0k
views
Comment: C: Method of Checking for Mutation Patterns
7.9 years ago by L. A. Liggett ▴ 130
2
votes
4
replies
2.0k
views
Method of Checking for Mutation Patterns
sequencing
updated 7.9 years ago by ▴ 180 • written 7.9 years ago by ▴ 130
0
votes
0
replies
2.0k
views
Comment: C: Method of Checking for Mutation Patterns
7.9 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
2.4k
views
Comment: C: Derive Consensus Read from pairwise2 alignment
8.0 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
2.6k
views
Comment: C: PCR Amplification necessity in RNASeq
8.0 years ago by L. A. Liggett ▴ 130
2
votes
4
replies
2.6k
views
PCR Amplification necessity in RNASeq
RNA-Seq
8.0 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
1.8k
views
Comment: C: What causes measured sequencing depth variation
8.0 years ago by L. A. Liggett ▴ 130
0
votes
2
replies
1.8k
views
What causes measured sequencing depth variation
next-gen
8.0 years ago by L. A. Liggett ▴ 130
1
vote
1
reply
2.4k
views
Accounting for off-target reads
alignment sequencing
updated 8.1 years ago by ★ 5.0k • written 8.1 years ago by ▴ 130
3
votes
1
reply
14k
views
Answer: A: Converting Illumina fastq quality scores to phred
8.2 years ago by L. A. Liggett ▴ 130
0
votes
0
replies
1.7k
views
Answer: A: Genome-Wide Sequencing Depth of Coverage Relationship to Genomic Regional Variat
8.2 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
1.9k
views
Comment: C: purify tumor samples and remove normal cells
8.2 years ago by L. A. Liggett ▴ 130
1
vote
1
reply
2.5k
views
Comment: C: Minor allele frequency
8.2 years ago by L. A. Liggett ▴ 130
0
votes
1
reply
14k
views
Comment: C: Converting Illumina fastq quality scores to phred
8.2 years ago by L. A. Liggett ▴ 130
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