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Understanding Uncommon Genotype Formats in VCF Files Generated by nf-core RNAvar Pipeline
genotype rnaseq
updated 11 months ago by 165k • written 11 months ago by ▴ 40
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1.1k
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Comment: Comment: How to go for Batch correction in RNA-seq expeiment conducted based on imbalanc
19 months ago by ASid ▴ 40
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2
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1.1k
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How to go for Batch correction in RNA-seq expeiment conducted based on imbalanced Experimental design ?
sva rna-seq batch-effect deseq2
updated 19 months ago by ★ 1.2k • written 19 months ago by ▴ 40
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1.3k
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Comment: Comment: What are the rules on when it is acceptable to use a paired t-test for lab anima
3.1 years ago by ASid ▴ 40
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1
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1.3k
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Comment: Comment: What are the rules on when it is acceptable to use a paired t-test for lab anima
3.1 years ago by ASid ▴ 40
2
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4
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1.3k
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What are the rules on when it is acceptable to use a paired t-test for lab animals?
t-test
updated 2.2 years ago by 44k • written 3.1 years ago by ▴ 40
1
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3
replies
1.9k
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Repeated measures design matrix controlling for covariates age and sex
analysis Paired
updated 3.4 years ago by ★ 7.8k • written 3.4 years ago by ▴ 40
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1
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1.9k
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Answer: Answer: Repeated measures design matrix controlling for covariates age and sex
3.4 years ago by ASid ▴ 40
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1
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5.0k
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Comment: Comment: Illumina HumanHT-12 V3.0 expression beadchip reading data
3.6 years ago by ASid ▴ 40
1
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7
replies
1.5k
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GSEA Preranked Query
GSEA GEAPreranked
updated 4.2 years ago by 20 • written 4.4 years ago by ▴ 40
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1
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1.5k
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Comment: C: GSEA Preranked Query
4.4 years ago by ASid ▴ 40
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1
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1.5k
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Comment: C: GSEA Preranked Query
4.4 years ago by ASid ▴ 40
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1
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1.5k
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Comment: A: GSEA Preranked Query
4.4 years ago by ASid ▴ 40
6
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5
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3.2k
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RNA-Seq:How to know RNA-seq data is Strand-Specific or not based on only fastq files available in public data repositories such as SRA?
rna-seq
updated 5.1 years ago by ★ 9.6k • written 6.1 years ago by ▴ 40
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1
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1.5k
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Comment: C: Differential expression analysis of few genes from rnaseq or microarray
5.2 years ago by ASid ▴ 40
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0
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1.5k
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Comment: C: Differential expression analysis of few genes from rnaseq or microarray
5.2 years ago by ASid ▴ 40
4
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6
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1.5k
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Differential expression analysis of few genes from rnaseq or microarray
RNA-Seq microarray Differentially Expresses genes
5.2 years ago by ASid ▴ 40
1
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0
replies
5.1k
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Comment: C: illumina Arrays Illumina HumanHT-12 V3.0 expression beadchip reading data
5.3 years ago by ASid ▴ 40
0
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1
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5.1k
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Comment: C: illumina Arrays Illumina HumanHT-12 V3.0 expression beadchip reading data
5.3 years ago by ASid ▴ 40
0
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1
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5.1k
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Comment: C: illumina Arrays Illumina HumanHT-12 V3.0 expression beadchip reading data
5.3 years ago by ASid ▴ 40
8
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5
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5.1k
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illumina Arrays Illumina HumanHT-12 V3.0 expression beadchip reading data
microarray Illumina
updated 5.3 years ago by 89k • written 5.3 years ago by ▴ 40
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1
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3.2k
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Comment: C: Correlation test for multiple variables and adjusted p values
5.6 years ago by ASid ▴ 40
2
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4
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3.2k
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Correlation test for multiple variables and adjusted p values
correlation gene to gene associations
updated 5.6 years ago by 11k • written 5.6 years ago by ▴ 40
0
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1
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1.4k
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rna seq single ended -Information on Rseqc report
Rseqc RNA-seq
updated 18 months ago by 44k • written 6.1 years ago by ▴ 40
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1
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1.8k
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Comment: C: RNA seq stranded
6.1 years ago by ASid ▴ 40
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0
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1.8k
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Comment: A: RNA seq stranded
6.1 years ago by ASid ▴ 40
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5
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1.8k
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RNA seq stranded
RNA-Seq
6.1 years ago by ASid ▴ 40
2
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4
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14k
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How to use TPM from RNA seq data analysis for differential gene expression analysis? which statistical methods are reuired to be performed.
RNA-Seq
updated 6.8 years ago by 20 • written 8.8 years ago by ▴ 40
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2
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3.9k
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WGCNA export network into cytoscape : problem
R wgcna cytoscape network export
updated 7.7 years ago by 47k • written 7.7 years ago by ▴ 40
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1
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3.6k
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Comment: C: Illumina microarray dataset analysis
8.7 years ago by ASid ▴ 40
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1
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3.6k
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Comment: C: Illumina microarray dataset analysis
8.7 years ago by ASid ▴ 40
0
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7
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3.6k
views
Illumina microarray dataset analysis
microarray illumina chip data
updated 8.7 years ago by ▴ 50 • written 8.7 years ago by ▴ 40
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