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Comment: C: Subset multiple columns in R or unix
5.6 years ago by daniele.avancini ▴ 70
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6.9k
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Comment: C: How to find differentially expressed genes between three groups?
5.7 years ago by daniele.avancini ▴ 70
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6.9k
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Answer: A: How to find differentially expressed genes between three groups?
5.7 years ago by daniele.avancini ▴ 70
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Answer: A: Correlation matrix between enhancers and promoters (human)?
5.8 years ago by daniele.avancini ▴ 70
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4
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1.4k
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Correlation matrix between enhancers and promoters (human)?
enhacer promoters correlation CAGE
5.8 years ago by daniele.avancini ▴ 70
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1.4k
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Comment: C: Correlation matrix between enhancers and promoters (human)?
5.8 years ago by daniele.avancini ▴ 70
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6.1k
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Diffbind for ATAC-seq data with no controls
Diffbind ATAC-seq
updated 22 months ago by ★ 2.1k • written 6.5 years ago by ▴ 70
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Comment: C: Mitochondrial contamination over 90% in published atac-seq dataset.
6.8 years ago by daniele.avancini ▴ 70
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Comment: C: Mitochondrial contamination over 90% in published atac-seq dataset.
7.0 years ago by daniele.avancini ▴ 70
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5.5k
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Comment: C: Mitochondrial contamination over 90% in published atac-seq dataset.
7.0 years ago by daniele.avancini ▴ 70
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5.5k
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Comment: C: Mitochondrial contamination over 90% in published atac-seq dataset.
7.0 years ago by daniele.avancini ▴ 70
4
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7
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5.5k
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Mitochondrial contamination over 90% in published atac-seq dataset.
atac-seq mtDNA bowtie2 mitochondrial contamination
7.0 years ago by daniele.avancini ▴ 70
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5.9k
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Comment: C: setting Coldata levels in Deseq2
7.1 years ago by daniele.avancini ▴ 70
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Comment: C: Huge difference between differential peaks with EdgeR and DESeq2 using Diffbind
7.1 years ago by daniele.avancini ▴ 70
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5.5k
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Huge difference between differential peaks with EdgeR and DESeq2 using Diffbind
ChIP-Seq R Diffbind edgeR DESeq2
7.1 years ago by daniele.avancini ▴ 70
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