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prinseq error: Use of uninitialized value $qual in scalar chomp
prinseq software error sequence
updated 3.8 years ago by 20 • written 6.5 years ago by ▴ 50
0
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0
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1.8k
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Comment: C: concat fasta sequences based on some common header string
5.1 years ago by mforthman ▴ 50
0
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1
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1.8k
views
Comment: C: concat fasta sequences based on some common header string
5.1 years ago by mforthman ▴ 50
3
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5
replies
1.8k
views
concat fasta sequences based on some common header string
sequence DNA fasta
updated 5.1 years ago by 164k • written 5.1 years ago by ▴ 50
0
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0
replies
1.3k
views
Comment: C: generating 'maximal' cds sequence from multiple isoforms of a gene
5.1 years ago by mforthman ▴ 50
3
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2
replies
1.3k
views
generating 'maximal' cds sequence from multiple isoforms of a gene
gene gff CDS
updated 5.1 years ago by ★ 3.8k • written 5.1 years ago by ▴ 50
1
vote
3
replies
1.8k
views
using NCBI SRA data for prinseq
sequence software error fastq sra prinseq
updated 6.5 years ago by 14k • written 6.5 years ago by ▴ 50
0
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0
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1.3k
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search text in one file and then replace with text from another file PART 2
search replace python
updated 7.0 years ago by 20 • written 7.1 years ago by ▴ 50
0
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0
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4.0k
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Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
1
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0
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4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
0
replies
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
0
replies
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
3
replies
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
5
votes
37
replies
4.0k
views
search text in one file and then replace with text from another file
search replace multiple files
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
1
reply
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
0
replies
4.0k
views
Comment: C: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
2
replies
4.0k
views
Comment: A: search text in one file and then replace with text from another file
7.1 years ago by mforthman ▴ 50
0
votes
0
replies
2.0k
views
Modifying perl script to not print redundant sequences and to fix length of sequences outputted from blast
perl dna blast
8.3 years ago by mforthman ▴ 50
0
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0
replies
1.9k
views
Post-processing of reciprocal best hits output
blast reciprocal best hits fasta
8.4 years ago by mforthman ▴ 50
0
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3
replies
1.9k
views
Clustering RBH hits from multiple outputs
Reciprocal best hits blast clustering
8.4 years ago by mforthman ▴ 50
0
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0
replies
1.9k
views
Comment: C: Clustering different RBH hits
8.4 years ago by mforthman ▴ 50
0
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0
replies
1.9k
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Comment: C: Clustering different RBH hits
8.4 years ago by mforthman ▴ 50
0
votes
1
reply
2.3k
views
Comment: C: FrameDP installation issue
8.4 years ago by mforthman ▴ 50
0
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1
reply
2.3k
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Comment: C: FrameDP installation issue
8.4 years ago by mforthman ▴ 50
0
votes
1
reply
2.3k
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Comment: C: FrameDP installation issue
8.4 years ago by mforthman ▴ 50
0
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1
reply
2.3k
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Comment: C: FrameDP installation issue
8.4 years ago by mforthman ▴ 50
0
votes
1
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2.3k
views
Comment: C: FrameDP installation issue
8.4 years ago by mforthman ▴ 50
0
votes
1
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2.3k
views
Comment: C: FrameDP installation issue
8.4 years ago by mforthman ▴ 50
2
votes
13
replies
2.3k
views
FrameDP installation issue
FrameDP
8.4 years ago by mforthman ▴ 50
0
votes
2
replies
2.6k
views
Exonerate not producing output files
exonerate
updated 8.4 years ago by 20 • written 8.5 years ago by ▴ 50
2
votes
1
reply
6.3k
views
Reciprocal Best Hits across more than 2 species
reciprocal best hits blast transcriptomes exons
updated 8.5 years ago by ★ 4.0k • written 8.5 years ago by ▴ 50
0
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0
replies
1.6k
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Comment: C: A complex situation to retreive subset of sequence data
8.5 years ago by mforthman ▴ 50
0
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0
replies
3.3k
views
Comment: C: Several exonerate options; which to choose?
8.5 years ago by mforthman ▴ 50
0
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2
replies
3.3k
views
Several exonerate options; which to choose?
exonerate exon-intron boundaries
updated 8.5 years ago by 28k • written 8.5 years ago by ▴ 50
0
votes
3
replies
1.6k
views
A complex situation to retreive subset of sequence data
dna data retrieval exon
updated 8.5 years ago by ★ 1.5k • written 8.5 years ago by ▴ 50
0
votes
0
replies
8.4k
views
Comment: C: How to extract exon sequences from annotated genome
8.5 years ago by mforthman ▴ 50
4
votes
8
replies
8.4k
views
How to extract exon sequences from annotated genome
annotation genome exon
updated 8.5 years ago by 7.6k • written 8.5 years ago by ▴ 50
0
votes
1
reply
8.4k
views
Comment: A: How to extract exon sequences from annotated genome
8.5 years ago by mforthman ▴ 50
0
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0
replies
2.6k
views
Comment: C: Exonerate not producing output files
8.5 years ago by mforthman ▴ 50
0
votes
0
replies
2.0k
views
Generate .gtf file for reference protein data
gtf protein gff conversion
updated 8.5 years ago by ★ 4.0k • written 8.5 years ago by ▴ 50
1
vote
2
replies
2.1k
views
Select set of genes present in all species tested and unique within each genome/transcriptome
transcriptome genome exon capture
8.5 years ago by mforthman ▴ 50
53 results • Page 1 of 2
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