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4
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6
replies
3.6k
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ReactomePA enrichPathway function
ReactomePA enrichPathway
updated 24 months ago by • 0 • written 4.6 years ago by ▴ 400
13
votes
6
replies
1.2k
views
6 follow
Is training data used exclusively in machine learning
learning machine
updated 3.5 years ago by 88k • written 3.5 years ago by ▴ 400
0
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0
replies
3.2k
views
Comment: Comment: Scatter plot of DEG in R
3.6 years ago by ATCG ▴ 400
2
votes
2
replies
3.2k
views
Scatter plot of DEG in R
R RNA-seq Bioconductor DEG
3.6 years ago by ATCG ▴ 400
0
votes
0
replies
63k
views
Comment: Comment: In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
3.6 years ago by ATCG ▴ 400
8
votes
5
replies
4.4k
views
Can someone explain in detail the meaning of a gseaplot in GSEA
gseaplot
updated 3.7 years ago by ▴ 270 • written 4.6 years ago by ▴ 400
0
votes
1
reply
159k
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
3.7 years ago by ATCG ▴ 400
1
vote
0
replies
33k
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Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
0
votes
1
reply
33k
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Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
0
votes
1
reply
33k
views
Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
0
votes
1
reply
33k
views
Comment: C: Batch correction in DESeq2
updated 4.0 years ago by 88k • written 4.0 years ago by ▴ 400
0
votes
1
reply
33k
views
Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
0
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1
reply
33k
views
Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
0
votes
1
reply
33k
views
Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
1
vote
1
reply
926
views
RNA-seq batches across different tissues
RNA-Seq Normalization
4.0 years ago by ATCG ▴ 400
0
votes
1
reply
33k
views
Comment: C: Batch correction in DESeq2
4.0 years ago by ATCG ▴ 400
0
votes
0
replies
694
views
RAP-seq datasets but no corresponding RNA-seq
RNA-Seq TRAP-Seq Translation Transcription
4.0 years ago by ATCG ▴ 400
0
votes
0
replies
857
views
Normalization for RNA-Seq samples
RNA-Seq Tissue specific Transcriptome
4.1 years ago by ATCG ▴ 400
1
vote
2
replies
984
views
help clarify ways to measure coverage in RNA-Seq libraries
RNA-Seq coverage
4.3 years ago by ATCG ▴ 400
0
votes
0
replies
984
views
Comment: C: help clarify ways to measure coverage in RNA-Seq libraries
4.3 years ago by ATCG ▴ 400
1
vote
0
replies
3.6k
views
Comment: C: Understanding the colData in DESeq2
4.3 years ago by ATCG ▴ 400
0
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1
reply
3.6k
views
Comment: C: Understanding the colData in DESeq2
4.3 years ago by ATCG ▴ 400
0
votes
1
reply
3.6k
views
Comment: C: Understanding the colData in DESeq2
4.3 years ago by ATCG ▴ 400
4
votes
6
replies
3.6k
views
Understanding the colData in DESeq2
DEseq2 ColData LFC
4.3 years ago by ATCG ▴ 400
0
votes
0
replies
3.7k
views
Comment: C: HISAT2: does the parameter -k 1 means unique mapping?
4.3 years ago by ATCG ▴ 400
0
votes
0
replies
891
views
Comment: C: over-representation of sequences that map to "Drosophila melanogaster signal rec
4.3 years ago by ATCG ▴ 400
0
votes
2
replies
891
views
over-representation of sequences that map to "Drosophila melanogaster signal recognition particle
RNA-Seq TRAP-Seq FastQC SRP representation
4.3 years ago by ATCG ▴ 400
0
votes
0
replies
1.2k
views
Comment: C: Discounting secreted proteins from with data of signal recognition particle tran
4.3 years ago by ATCG ▴ 400
0
votes
1
reply
1.3k
views
Comment: C: Differential gene expression using DESeq2 on Ribo-Seq data
4.3 years ago by ATCG ▴ 400
1
vote
3
replies
1.3k
views
Differential gene expression using DESeq2 on Ribo-Seq data
DESeq2 Ribo-Seq Differential translation
updated 4.3 years ago by 88k • written 4.3 years ago by ▴ 400
0
votes
0
replies
6.6k
views
Comment: C: Is removing rRNA a necessary step in RNA-seq?
4.4 years ago by ATCG ▴ 400
0
votes
1
reply
6.6k
views
Comment: C: Is removing rRNA a necessary step in RNA-seq?
4.4 years ago by ATCG ▴ 400
0
votes
1
reply
6.6k
views
Comment: C: Is removing rRNA a necessary step in RNA-seq?
4.4 years ago by ATCG ▴ 400
1
vote
1
reply
1.2k
views
Ribo-seq data analysis using an RNA-Seq analysis pipeline
RNA-Seq Ribo-Seq TRAP-Seq
updated 4.4 years ago by ★ 4.1k • written 4.4 years ago by ▴ 400
0
votes
0
replies
749
views
Protein annotation tool
Proteins
4.4 years ago by ATCG ▴ 400
0
votes
2
replies
1.3k
views
Comment: C: Change the field separator
4.4 years ago by ATCG ▴ 400
7
votes
8
replies
1.3k
views
Change the field separator
R awk field separator
updated 4.4 years ago by ★ 1.3k • written 4.4 years ago by ▴ 400
0
votes
0
replies
2.0k
views
Comment: C: Is it appropriate to apply quantile normalization on RNA-Seq before computing th
4.4 years ago by ATCG ▴ 400
0
votes
1
reply
2.0k
views
Comment: C: Is it appropriate to apply quantile normalization on RNA-Seq before computing th
4.4 years ago by ATCG ▴ 400
2
votes
4
replies
2.0k
views
Is it appropriate to apply quantile normalization on RNA-Seq before computing the Pearson correlation?
RNA-Seq Quantile Normalization Correlation
4.4 years ago by ATCG ▴ 400
4
votes
2
replies
3.6k
views
Is it possible to run DESeq with only two replicates in one group?
RNA-Seq DESeq2 Replicates
updated 4.5 years ago by 85k • written 4.5 years ago by ▴ 400
0
votes
10
replies
1.3k
views
Differential gene expression analysis
RNA-Seq DESeq2
updated 4.5 years ago by 14k • written 4.5 years ago by ▴ 400
0
votes
1
reply
1.3k
views
Comment: C: Differential gene expression analysis
4.5 years ago by ATCG ▴ 400
0
votes
1
reply
1.3k
views
Comment: C: Differential gene expression analysis
4.5 years ago by ATCG ▴ 400
0
votes
1
reply
1.3k
views
Comment: C: Differential gene expression analysis
4.5 years ago by ATCG ▴ 400
0
votes
1
reply
2.2k
views
Comment: C: How to estimate the inter sample and inter replicate correlation coefficient?
4.5 years ago by ATCG ▴ 400
0
votes
1
reply
2.2k
views
Comment: C: How to estimate the inter sample and inter replicate correlation coefficient?
4.5 years ago by ATCG ▴ 400
3
votes
5
replies
2.2k
views
How to estimate the inter sample and inter replicate correlation coefficient?
RNA-Seq Replicates R2 Correlation coefficients
4.5 years ago by ATCG ▴ 400
0
votes
0
replies
4.4k
views
Comment: C: Can someone explain in detail the meaning of a gseaplot in GSEA
4.6 years ago by ATCG ▴ 400
0
votes
1
reply
4.4k
views
Comment: C: Can someone explain in detail the meaning of a gseaplot in GSEA
4.6 years ago by ATCG ▴ 400
167 results • Page 1 of 4
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