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5
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2
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1.3k
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How to subset DESeq2 results
DESEq2 GSEA
updated 4.6 years ago by 13k • written 4.6 years ago by ▴ 400
0
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0
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2.1k
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Comment: C: Gene set enrichment analysis input data
4.6 years ago by ATCG ▴ 400
2
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4
replies
2.1k
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Gene set enrichment analysis input data
GSE DESeq2
4.6 years ago by ATCG ▴ 400
1
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1
reply
1.2k
views
Infer strandedness of my single-end RNA-Seq data
RNA-Seq HISAT2 strandedness
updated 4.6 years ago by ★ 4.1k • written 4.6 years ago by ▴ 400
0
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0
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16k
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Comment: C: Which strand specific option need to be used with HISAT2?
4.6 years ago by ATCG ▴ 400
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0
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2.9k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
4.6 years ago by ATCG ▴ 400
0
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1
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2.9k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
4.6 years ago by ATCG ▴ 400
0
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0
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2.9k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
4.6 years ago by ATCG ▴ 400
0
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0
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2.9k
views
Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
4.6 years ago by ATCG ▴ 400
0
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1
reply
2.9k
views
Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
4.6 years ago by ATCG ▴ 400
0
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1
reply
2.9k
views
Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
4.6 years ago by ATCG ▴ 400
17
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26
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2.9k
views
File conversion in bash, discrepancy in number of lines after conversion.
bash
updated 20 months ago by 44k • written 4.6 years ago by ▴ 400
0
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3
replies
2.9k
views
Comment: C: file conversion in bash
4.6 years ago by ATCG ▴ 400
0
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2
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2.9k
views
Comment: C: file conversion in bash
4.6 years ago by ATCG ▴ 400
0
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1
reply
2.9k
views
Comment: C: file conversion in bash
4.6 years ago by ATCG ▴ 400
0
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1
reply
2.9k
views
Comment: C: file conversion in bash
4.6 years ago by ATCG ▴ 400
1
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0
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3.6k
views
Comment: C: ReactomePA enrichPathway function
4.6 years ago by ATCG ▴ 400
0
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1
reply
159k
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
4.6 years ago by ATCG ▴ 400
0
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2
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3.6k
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Comment: C: ReactomePA enrichPathway function
4.6 years ago by ATCG ▴ 400
0
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1
reply
6.2k
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Comment: C: Selecting the background for GO enrichment analysis (proteomics)
4.6 years ago by ATCG ▴ 400
0
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1
reply
6.2k
views
Comment: C: Selecting the background for GO enrichment analysis (proteomics)
4.6 years ago by ATCG ▴ 400
0
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0
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28k
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Comment: C: Selection Of Background Gene Set In Enrichment Analysis
4.6 years ago by ATCG ▴ 400
1
vote
6
replies
1.1k
views
Filter fastq files
Fastq trimmomatic
updated 4.6 years ago by 102k • written 4.6 years ago by ▴ 400
0
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0
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1.1k
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Comment: C: Filter fastq files
4.6 years ago by ATCG ▴ 400
0
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0
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1.3k
views
Comment: A: over-represented is not removed after trimmomatic
4.6 years ago by ATCG ▴ 400
0
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2
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1.3k
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over-represented is not removed after trimmomatic
trimmomatic fastqc
4.6 years ago by ATCG ▴ 400
2
votes
2
replies
1.1k
views
Is indexing a genome the same as annotating a genome?
samtools index genome indexing
4.6 years ago by ATCG ▴ 400
0
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0
replies
5.6k
views
Comment: C: DESeq2 Error: package or namespace load failed for 'DESeq2'
4.6 years ago by ATCG ▴ 400
2
votes
4
replies
5.6k
views
DESeq2 Error: package or namespace load failed for 'DESeq2'
RNA-Seq DESeq2 image not found
updated 4.6 years ago by 4.1k • written 4.6 years ago by ▴ 400
0
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1
reply
1.8k
views
Comment: C: Drosophila reference genomes
4.6 years ago by ATCG ▴ 400
0
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1
reply
1.1k
views
Comment: C: How to recognize single-end fastq files
4.6 years ago by ATCG ▴ 400
2
votes
2
replies
4.2k
views
Do illumina instruments generate four fastq files per sample?
Fasq Illumina lane
updated 4.6 years ago by 147k • written 4.6 years ago by ▴ 400
2
votes
4
replies
1.1k
views
How to recognize single-end fastq files
RNA-Seq Fastq single-end
updated 4.6 years ago by 147k • written 4.6 years ago by ▴ 400
0
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0
replies
1.8k
views
Comment: C: Pathway vs Network
4.6 years ago by ATCG ▴ 400
5
votes
2
replies
1.8k
views
Pathway vs Network
Pathway Networks RNA-Seq
updated 4.6 years ago by 20k • written 4.6 years ago by ▴ 400
0
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0
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1.8k
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Comment: C: Drosophila reference genomes
4.6 years ago by ATCG ▴ 400
0
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2
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1.8k
views
Comment: C: Drosophila reference genomes
4.6 years ago by ATCG ▴ 400
8
votes
8
replies
1.8k
views
Drosophila reference genomes
genome Drosophila Model organisms Annotation
updated 4.6 years ago by 147k • written 4.6 years ago by ▴ 400
2
votes
2
replies
4.5k
views
Download NCBI GEO dataset
RNA-Seq GEO GSE
updated 4.6 years ago by ▴ 570 • written 4.6 years ago by ▴ 400
0
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0
replies
9.4k
views
Comment: C: Remove Blacklist regions from ChIP-seq Data
updated 5.1 years ago by 44k • written 8.4 years ago by ▴ 400
0
votes
3
replies
1.2k
views
Extracting related sequences from a FASTA file
Sequence comparizon Data mining kmer
updated 5.8 years ago by 20 • written 6.0 years ago by ▴ 400
1
vote
3
replies
4.2k
views
Filter out related individuals from a vcf file using Plink or Hail
Hail Plink VCF
updated 5.9 years ago by 12k • written 7.0 years ago by ▴ 400
4
votes
6
replies
2.6k
views
Bulk primer design
primers bulk FASTA kmer
updated 6.0 years ago by 164k • written 6.0 years ago by ▴ 400
0
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1
reply
1.4k
views
Comment: C: where to keep scripts for new software
6.2 years ago by ATCG ▴ 400
1
vote
4
replies
1.4k
views
where to keep scripts for new software
$PATH Unix install
6.2 years ago by ATCG ▴ 400
4
votes
0
replies
192k
views
Answer: A: Generate Vcf.Gz File And Its Index File Vcf.Gz.Tbi
updated 6.2 years ago by 12k • written 7.2 years ago by ▴ 400
0
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0
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1.5k
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Comment: C: Pacbio inversion visualization and IGV
6.2 years ago by ATCG ▴ 400
4
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3
replies
2.8k
views
GMAP download page
RNA-Seq GMAP PacBio
6.2 years ago by ATCG ▴ 400
0
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1
reply
2.8k
views
Comment: C: GMAP download page
6.2 years ago by ATCG ▴ 400
5
votes
8
replies
3.1k
views
differential gene expression analysis
confounders RNA-Seq Limma EdgeR Regression
6.6 years ago by ATCG ▴ 400
167 results • Page 2 of 4
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