Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
1.9k
views
Answer: Answer: some contradiction in fastqc
updated 2.2 years ago by 44k • written 9.2 years ago by 3.2k
0
votes
1
reply
34k
views
Comment: C: Help a graduate student going into Bioinformatics looking for a new personal lap
9.3 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
2.0k
views
Comment: Comment: Assessing diversity of random oligonucleotides
updated 2.1 years ago by 44k • written 9.3 years ago by 3.2k
0
votes
1
reply
3.0k
views
Comment: C: Filtering BLAST results.
9.3 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
2.7k
views
How to generate bam files for Quiver
quiver PacBio
updated 2.1 years ago by 44k • written 9.3 years ago by 3.2k
1
vote
1
reply
11k
views
Comment: Comment: Truncated SAM file - odd characters
updated 2.1 years ago by 44k • written 9.3 years ago by 3.2k
1
vote
1
reply
11k
views
Answer: Answer: Truncated SAM file - odd characters
updated 2.1 years ago by 44k • written 9.3 years ago by 3.2k
0
votes
0
replies
1.6k
views
Comment: C: How to prepare RNA-seq data for Piano?
9.3 years ago by Biomonika (Noolean) 3.2k
1
vote
1
reply
16k
views
Comment: Comment: TRIMMOMATRIC Nextera trimming
updated 2.1 years ago by 44k • written 9.3 years ago by 3.2k
1
vote
1
reply
1.6k
views
whole genome alignments accompanying papers - where to deposit them?
alignments database
updated 24 months ago by 44k • written 9.5 years ago by 3.2k
0
votes
0
replies
2.2k
views
Comment: Comment: what is the cases when the insert size between mate pairs is zero?
updated 24 months ago by 44k • written 9.4 years ago by 3.2k
0
votes
2
replies
2.2k
views
Comment: Comment: what is the cases when the insert size between mate pairs is zero?
updated 23 months ago by 44k • written 9.4 years ago by 3.2k
0
votes
0
replies
2.8k
views
Comment: Comment: reviewing a paper with software/code I cannot run
updated 23 months ago by 44k • written 9.4 years ago by 3.2k
7
votes
9
replies
2.8k
views
8 follow
Forum: reviewing a paper with software/code I cannot run
submission code-review open-access
updated 23 months ago by 44k • written 9.4 years ago by 3.2k
17
votes
23
replies
9.7k
views
13 follow
How To Assemble Chloroplast Genome?
genome assembly
updated 22 months ago by 44k • written 12.6 years ago by 3.2k
0
votes
0
replies
6.7k
views
Comment: Comment: Short Sequence BLAST Search with Gaps
updated 23 months ago by 44k • written 9.5 years ago by 3.2k
0
votes
1
reply
6.7k
views
Comment: C: Short Sequence BLAST Search with Gaps
9.5 years ago by Biomonika (Noolean) 3.2k
1
vote
1
reply
1.7k
views
sequencing through heterochromatin (e.g. with PacBio)
heterochromatin PacBio sequencing
updated 9.5 years ago by 35k • written 9.5 years ago by 3.2k
0
votes
2
replies
13k
views
Comment: Comment: Flower plot in R ?
updated 22 months ago by 44k • written 9.5 years ago by 3.2k
0
votes
0
replies
1.6k
views
Answer: Answer: when the local alignment tends to work as global alignment?
updated 22 months ago by 44k • written 9.5 years ago by 3.2k
0
votes
0
replies
3.1k
views
Comment: Comment: Using RNA-seq expression data in a classification model
updated 22 months ago by 44k • written 9.5 years ago by 3.2k
0
votes
2
replies
5.2k
views
Comment: C: Trimmomatics parameters for WGS data quality improvement
9.5 years ago by Biomonika (Noolean) 3.2k
1
vote
1
reply
2.6k
views
Answer: Answer: visualization of gene-miRNA interaction
updated 22 months ago by 44k • written 9.5 years ago by 3.2k
0
votes
0
replies
2.5k
views
Comment: C: Single gene circos plot possible?
9.5 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
2.7k
views
Comment: Comment: cn.mops calling copy number 1 state as CNV using the haplocn.mops function in an
updated 2.9 years ago by 44k • written 9.5 years ago by 3.2k
1
vote
4
replies
5.2k
views
Mapping mate-pairs reads with bowtie2
aligner mate-pair bowtie2
updated 22 months ago by 44k • written 9.5 years ago by 3.2k
1
vote
0
replies
34k
views
Comment: Comment: Help a graduate student going into Bioinformatics looking for a new personal lap
updated 2.1 years ago by 44k • written 9.5 years ago by 3.2k
4
votes
1
reply
2.0k
views
span of GFF file
GFF span
updated 3.7 years ago by 44k • written 9.6 years ago by 3.2k
0
votes
0
replies
3.2k
views
Comment: Comment: Command to estimate how long local blastx take to finish the job?
updated 2.4 years ago by 44k • written 9.6 years ago by 3.2k
4
votes
1
reply
4.4k
views
Answer: Answer: How to find out the reverse complement of DNA from each FASTA formated sequence
updated 2.4 years ago by 44k • written 9.6 years ago by 3.2k
0
votes
1
reply
13k
views
Comment: C: biomart gene coordinates do not correspond to genome browser
9.6 years ago by Biomonika (Noolean) 3.2k
1
vote
0
replies
3.1k
views
Comment: C: How to compare assembly from Trinity and Velvet/Oases
9.6 years ago by Biomonika (Noolean) 3.2k
0
votes
2
replies
2.3k
views
per bp depth intersected with gff file
bam bedtools depth coverage
updated 9.6 years ago by 104k • written 9.6 years ago by 3.2k
0
votes
0
replies
4.9k
views
Comment: Comment: WGBS data analysis in Galaxy?
updated 2.4 years ago by 44k • written 9.6 years ago by 3.2k
0
votes
0
replies
1.7k
views
Comment: Comment: shall we do PCA analysis in target region sequencing project
updated 2.4 years ago by 44k • written 9.7 years ago by 3.2k
0
votes
0
replies
2.6k
views
Answer: A: flip mate-pair libraries from rf to fr
9.7 years ago by Biomonika (Noolean) 3.2k
4
votes
6
replies
4.6k
views
How To Identify Genes In Transposable Elements
genes orf
updated 9.7 years ago by 20 • written 11.4 years ago by 3.2k
0
votes
0
replies
12k
views
Answer: Answer: Nice way to view primers amplicon on hg19
updated 2.5 years ago by 44k • written 9.7 years ago by 3.2k
2
votes
1
reply
3.0k
views
Answer: Answer: Ideal coverage required for PacBio error correction using HGAP
updated 2.5 years ago by 44k • written 9.7 years ago by 3.2k
0
votes
0
replies
1.9k
views
Comment: C: How to generate pair-wise alignments for all the orthologous gene pairs at once?
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
3.8k
views
Comment: C: How visualize better way the output data from Bayescan?
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
4.4k
views
Comment: C: lowercase fasta coordinates to GFF
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
2
replies
4.4k
views
Comment: C: lowercase fasta coordinates to GFF
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
2.5k
views
Comment: C: Exome sequencing and association
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
4.8k
views
Comment: C: DE analysis with [DESeq2] without replicates
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
0
replies
2.2k
views
Download unspliced RefSeq genes
RefSeq GRCh38
updated 2.5 years ago by 44k • written 9.7 years ago by 3.2k
0
votes
1
reply
3.9k
views
Comment: C: Why are there multiple RefSeq sequences occurring with the same name?
9.7 years ago by Biomonika (Noolean) 3.2k
0
votes
1
reply
5.8k
views
Comment: C: Obtain conservation (or % ident) in a multiple sequence alignment
9.7 years ago by Biomonika (Noolean) 3.2k
1
vote
0
replies
1.9k
views
Answer: Answer: How to let the galaxy local instance run (eg. tophat) @ multi-thread mode?
updated 2.5 years ago by 44k • written 9.7 years ago by 3.2k
0
votes
1
reply
2.1k
views
Answer: A: rnastar in galaxy
9.7 years ago by Biomonika (Noolean) 3.2k
445 results • Page 3 of 9
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6