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Answer: Answer: How to let the galaxy local instance run (eg. tophat) @ multi-thread mode?
updated 2.8 years ago by 44k • written 10.0 years ago by 3.2k
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2.1k
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Answer: A: rnastar in galaxy
10.0 years ago by Biomonika (Noolean) 3.2k
3
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1
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2.1k
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Extract all members of particular gene family (including pseudogenes)
genes coordinate
updated 2.8 years ago by 44k • written 10.0 years ago by 3.2k
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1
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2.2k
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Comment: C: Identify informative markers from two in silico digests?
10.0 years ago by Biomonika (Noolean) 3.2k
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Answer: A: Merging mapping results
10.0 years ago by Biomonika (Noolean) 3.2k
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2.2k
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Answer: A: Identify informative markers from two in silico digests?
10.0 years ago by Biomonika (Noolean) 3.2k
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Answer: Answer: Pacbio: extract fastq from h5 file based on quality filtering
updated 2.8 years ago by 44k • written 10.0 years ago by 3.2k
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2.9k
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Answer: C: How to create a Syntenic dotplot?
10.2 years ago by Biomonika (Noolean) 3.2k
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3.6k
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Comment: Comment: Database of common contaminants in human genome assemblies
updated 2.9 years ago by 44k • written 10.2 years ago by 3.2k
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4
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3.6k
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Database of common contaminants in human genome assemblies
contaminant assembly genome
updated 2.9 years ago by 44k • written 10.2 years ago by 3.2k
1
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1
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2.6k
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Is Target Site Duplication Part Of Repeatmasker Annotation?
repeatmasker annotation
updated 10.2 years ago by 20 • written 12.8 years ago by 3.2k
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1
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Comment: C: Convert FASTQ to FASTA, filter, then convert filtered FASTA back into FASTQ
10.2 years ago by Biomonika (Noolean) 3.2k
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Comment: C: Convert FASTQ to FASTA, filter, then convert filtered FASTA back into FASTQ
10.2 years ago by Biomonika (Noolean) 3.2k
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Comment: Comment: Fastq Trimmer problem
updated 3.0 years ago by 44k • written 10.3 years ago by 3.2k
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1
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4.1k
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Comment: Comment: BWA or SMALT mapping algorithm
updated 3.0 years ago by 44k • written 10.3 years ago by 3.2k
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1
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5.2k
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Comment: Comment: Combining RNA-seq data
updated 3.9 years ago by 44k • written 10.3 years ago by 3.2k
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Comment: Comment: Mate pair Illumina reads - recommended mapper of choice, adapter removal and PE
updated 3.9 years ago by 44k • written 10.3 years ago by 3.2k
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2
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Mate pair Illumina reads - recommended mapper of choice, adapter removal and PE contamination
matepair insertsize mapper adapters Illumina
updated 3.9 years ago by 44k • written 10.3 years ago by 3.2k
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2
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2.9k
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Comment: Comment: Masters Ideas in Computer Science that tackles Bioinformatics Problem
updated 3.9 years ago by 44k • written 10.3 years ago by 3.2k
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0
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21k
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Answer: Answer: In Silico Pcr Assay
updated 3.9 years ago by 44k • written 10.3 years ago by 3.2k
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0
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3.6k
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Answer: Answer: PacBio Technology Assemblers
updated 3.1 years ago by 44k • written 10.4 years ago by 3.2k
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1
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4.9k
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draw RNA secondary structure or lollipop without the sequence
structure lollipop RNA
updated 3.1 years ago by 44k • written 10.4 years ago by 3.2k
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0
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2.1k
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Comment: C: Comparing the RNAseq analysis data
10.4 years ago by Biomonika (Noolean) 3.2k
1
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1
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1.9k
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Answer: Answer: how can identify read depth
updated 3.1 years ago by 44k • written 10.4 years ago by 3.2k
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0
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4.9k
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Comment: Comment: GATK: Remove known variants from the sample vcf file
updated 3.1 years ago by 44k • written 10.4 years ago by 3.2k
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0
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1.9k
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Comment: Comment: Test for between trees
updated 3.1 years ago by 44k • written 10.4 years ago by 3.2k
1
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0
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3.9k
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Answer: A: fastq file question
10.4 years ago by Biomonika (Noolean) 3.2k
1
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1
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3.5k
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Answer: Answer: How To Find Missing Reads When A Sam File Result From An Extremely Big Fastq Fil
updated 3.1 years ago by 44k • written 10.5 years ago by 3.2k
1
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1
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4.1k
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Comment: C: Very large inferred maximum insert size!
10.5 years ago by Biomonika (Noolean) 3.2k
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3.9k
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Comment: C: Sinking into the swamp by Using DESeq without replicates !!
10.5 years ago by Biomonika (Noolean) 3.2k
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0
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3.9k
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Comment: Comment: self-study bioinformatics home projects
updated 3.1 years ago by 44k • written 10.5 years ago by 3.2k
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0
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7.1k
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Comment: C: edgeR / deSeq parallel usage
10.5 years ago by Biomonika (Noolean) 3.2k
14
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12
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3.3k
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Woman Sequenced With 454 Technology?
454
updated 10.5 years ago by 20 • written 12.7 years ago by 3.2k
0
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1
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5.6k
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Comment: C: The fastest way to check read orientation for mate pair library
10.5 years ago by Biomonika (Noolean) 3.2k
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0
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6.3k
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Comment: C: Create smaller bam file based on the list of sequences
10.5 years ago by Biomonika (Noolean) 3.2k
7
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10
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6.3k
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6 follow
Create smaller bam file based on the list of sequences
filter bam
updated 2.9 years ago by ▴ 740 • written 10.5 years ago by 3.2k
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1
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6.3k
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Comment: C: Create smaller bam file based on the list of sequences
10.5 years ago by Biomonika (Noolean) 3.2k
1
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0
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5.1k
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Comment: Comment: Template-specific primers design
updated 3.2 years ago by 44k • written 10.5 years ago by 3.2k
2
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0
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4.2k
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Answer: A: Which programming language to integrate several open source software into one wo
10.5 years ago by Biomonika (Noolean) 3.2k
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0
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2.8k
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Comment: C: Perl program needed to predict size of populatio of organisms. Program needs to
10.5 years ago by Biomonika (Noolean) 3.2k
1
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1
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3.9k
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Answer: A: What do you use to generates summary statistics of sequence and quality data for
10.5 years ago by Biomonika (Noolean) 3.2k
0
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1
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7.5k
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Comment: C: Comparison between .bam files
10.6 years ago by Biomonika (Noolean) 3.2k
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8.1k
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Comment: Comment: Comparing VCF Files
updated 3.2 years ago by 44k • written 10.6 years ago by 3.2k
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0
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2.1k
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Comment: C: Proposing the next generation of Biopieces: Biopieces2.0
10.6 years ago by Biomonika (Noolean) 3.2k
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3.0k
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Comment: C: Filling in inverted repeat gaps (chloroplast)
10.6 years ago by Biomonika (Noolean) 3.2k
3
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1
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12k
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Answer: Answer: Tool Recommendation Wanted For Cleaning Fasta/Fastq Files To Remove Unpaired Rea
updated 3.2 years ago by 44k • written 10.6 years ago by 3.2k
1
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1
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Answer: Answer: Filling in inverted repeat gaps (chloroplast)
updated 3.2 years ago by 44k • written 10.6 years ago by 3.2k
0
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0
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3.6k
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Comment: Comment: How to know if the third codon position is evolving too fast
updated 3.2 years ago by 44k • written 10.6 years ago by 3.2k
9
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3
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5.3k
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Visualize Insert Size For Mate-Pairs And Calculate Statistics
statistics
updated 10.6 years ago by ▴ 360 • written 11.1 years ago by 3.2k
0
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1
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4.6k
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Comment: C: Paper publication without qPCR validation
10.6 years ago by Biomonika (Noolean) 3.2k
447 results • Page 4 of 9
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