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1
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2
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1.1k
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Answer: Answer: Differential expressed genes - much more DE genes for one factor in the additive
10 weeks ago by BioinfGuru ★ 2.1k
3
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0
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1.3k
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Comment: Comment: Freelance Bioinformatician Required
10 weeks ago by BioinfGuru ★ 2.1k
1
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0
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731
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Answer: Answer: Trimmomatic or Cutadapt not Trimming my Adapters even though I see them clearly
10 weeks ago by BioinfGuru ★ 2.1k
1
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0
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517
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Comment: Comment: Resume building projects to break into bioinformatics?
11 weeks ago by BioinfGuru ★ 2.1k
0
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0
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468
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Comment: Comment: DEseq2 with different designs matrix
11 weeks ago by BioinfGuru ★ 2.1k
1
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0
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538
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Answer: Answer: I think batch correction didn't working in my dataset(ft. RunHarmony)
11 weeks ago by BioinfGuru ★ 2.1k
1
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0
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452
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Answer: Answer: Enhanced Volcano not working on ANY data. Coerces everything to NaN
11 weeks ago by BioinfGuru ★ 2.1k
0
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0
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596
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Comment: Comment: Differential gene expression (aiming to create heatmap) for raw RNAseq count dat
3 months ago by BioinfGuru ★ 2.1k
0
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1
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596
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Answer: Answer: Differential gene expression (aiming to create heatmap) for raw RNAseq count dat
3 months ago by BioinfGuru ★ 2.1k
0
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1
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530
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Comment: Comment: Batch correction for RNA-seq using ComBat-seq for same group and batch
3 months ago by BioinfGuru ★ 2.1k
0
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1
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530
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Comment: Comment: Batch correction for RNA-seq using ComBat-seq for same group and batch
3 months ago by BioinfGuru ★ 2.1k
0
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0
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207
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Are equal whisker lengths important in an RLE plot?
EDA plot RNAseq EDAseq RLE
3 months ago by BioinfGuru ★ 2.1k
0
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1
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530
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Comment: Comment: Batch correction for RNA-seq using ComBat-seq for same group and batch
3 months ago by BioinfGuru ★ 2.1k
0
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0
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422
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Comment: Comment: Need help with design/workflow please?
3 months ago by BioinfGuru ★ 2.1k
3
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4
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422
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Need help with design/workflow please?
deseq2 batch workflow
3 months ago by BioinfGuru ★ 2.1k
0
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0
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422
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Comment: Comment: Need help with design/workflow please?
3 months ago by BioinfGuru ★ 2.1k
0
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1
reply
819
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Comment: Comment: Htseq-count problem with gtf/gff file
3 months ago by BioinfGuru ★ 2.1k
2
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0
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378
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Answer: Answer: DESeq2 analysis of a chromosome region
3 months ago by BioinfGuru ★ 2.1k
4
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0
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686
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Answer: Answer: Books and Blogs guiding the programming practice in bioinformatic research?
3 months ago by BioinfGuru ★ 2.1k
0
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0
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363
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Comment: Comment: DEG with several conditions
3 months ago by BioinfGuru ★ 2.1k
0
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0
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686
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Comment: Comment: Books and Blogs guiding the programming practice in bioformatic research?
3 months ago by BioinfGuru ★ 2.1k
0
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0
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304
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Comment: Comment: Is there a database for housekeeping genes?
3 months ago by BioinfGuru ★ 2.1k
1
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2
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304
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Is there a database for housekeeping genes?
normalisation RNA-seq RUVseq Housekeeping-genes
3 months ago by BioinfGuru ★ 2.1k
0
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1
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323
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Comment: Comment: normalizing multiple conditions together or not
3 months ago by BioinfGuru ★ 2.1k
1
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1
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345
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Comment: Comment: Optimising False Positive Detection in NGS Pipelines Using Mapping and Base Qual
3 months ago by BioinfGuru ★ 2.1k
0
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0
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327
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Answer: Answer: p values, q values, stat.mean for gage() outputs - What to report and why?
3 months ago by BioinfGuru ★ 2.1k
0
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1
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448
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Answer: Answer: Annotating enhancer elements (GRCh38)
3 months ago by BioinfGuru ★ 2.1k
0
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0
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338
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Comment: Comment: DESeq2 on a complex design
3 months ago by BioinfGuru ★ 2.1k
0
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1
reply
793
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Comment: Comment: Grammar of Graphics for Heatmap
4 months ago by BioinfGuru ★ 2.1k
0
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0
replies
849
views
Comment: Comment: Could not locate a HISAT2 index corresponding to basename
4 months ago by BioinfGuru ★ 2.1k
0
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1
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404
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Comment: Comment: Normalizacion RNASeq Doubts
4 months ago by BioinfGuru ★ 2.1k
1
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1
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383
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Comment: Comment: Defining the formula/contrasts to detect DEGs between pre vs post treatment
4 months ago by BioinfGuru ★ 2.1k
0
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1
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404
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Answer: Answer: Normalizacion RNASeq Doubts
4 months ago by BioinfGuru ★ 2.1k
0
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1
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1.1k
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Comment: Comment: How to use NCBI annotation instead of Ensembl in analysing Transcriptome from RN
4 months ago by BioinfGuru ★ 2.1k
0
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1
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1.1k
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Comment: Comment: How to use NCBI annotation instead of Ensembl in analysing Transcriptome from RN
4 months ago by BioinfGuru ★ 2.1k
0
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0
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423
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Answer: Answer: Help with heatmaps
4 months ago by BioinfGuru ★ 2.1k
0
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0
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19k
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Comment: Comment: Continuously add lines to ggplot with for loop
4 months ago by BioinfGuru ★ 2.1k
0
votes
0
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296
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Answer: Answer: KO number id to gene symbol
4 months ago by BioinfGuru ★ 2.1k
1
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1
reply
1.1k
views
Answer: Answer: How to use NCBI annotation instead of Ensembl in analysing Transcriptome from RN
4 months ago by BioinfGuru ★ 2.1k
0
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0
replies
727
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Comment: Comment: FASTQC: per base n content fail
4 months ago by BioinfGuru ★ 2.1k
0
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0
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431
views
Comment: Comment: Changing font size in the key in heatmap.2
updated 4 months ago by 44k • written 4 months ago by ★ 2.1k
0
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1
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727
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Comment: Comment: FASTQC: per base n content fail
4 months ago by BioinfGuru ★ 2.1k
0
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1
reply
431
views
Answer: Answer: Changing font size in the key in heatmap.2
updated 4 months ago by 44k • written 4 months ago by ★ 2.1k
1
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1
reply
727
views
Answer: Answer: FASTQC: per base n content fail
4 months ago by BioinfGuru ★ 2.1k
0
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1
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494
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Comment: Comment: Why Are There Differences in RNA-seq Results?
4 months ago by BioinfGuru ★ 2.1k
1
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0
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553
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Comment: Comment: Problem with gather() in R
4 months ago by BioinfGuru ★ 2.1k
2
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1
reply
812
views
Comment: Comment: How to reassign the orientation of clusters in pheatmap
updated 4 months ago by 44k • written 4 months ago by ★ 2.1k
3
votes
2
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517
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Answer: Answer: Resume building projects to break into bioinformatics?
4 months ago by BioinfGuru ★ 2.1k
2
votes
1
reply
553
views
Answer: Answer: Problem with gather() in R
updated 4 months ago by 44k • written 4 months ago by ★ 2.1k
0
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0
replies
950
views
Comment: Comment: Conversion of Gene Name to Ensembl ID
4 months ago by BioinfGuru ★ 2.1k
478 results • Page 1 of 10
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