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746
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Answer:
Answer: Differential analysis of enrichment results
4 months ago by
BioinfGuru
★ 2.1k
1
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1
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746
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Comment:
Comment: Differential analysis of enrichment results
4 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
953
views
Answer:
Answer: Conversion of Gene Name to Ensembl ID
4 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
1.2k
views
Comment:
Comment: Running fastqc in parallel
4 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
527
views
Comment:
Comment: Pathway analysis for DGEList
4 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
527
views
Answer:
Answer: Pathway analysis for DGEList
4 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
195
views
Should I run SVA or not?
Clustering
SVA
Batch
4 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.2k
views
Comment:
Comment: Running fastqc in parallel
4 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
323
views
Answer:
Answer: Associations with small-ish patient clinical data with bulk RNA-seq expression
4 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
527
views
Comment:
Comment: Comparing two RNAseq runs for the same samples
4 months ago by
BioinfGuru
★ 2.1k
3
votes
2
replies
1.2k
views
Answer:
Answer: Running fastqc in parallel
4 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
321
views
Comment:
Comment: What does evidence of batch effect in bulk rnaseq look like?
4 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
321
views
What does evidence of batch effect in bulk rnaseq look like?
batches
sva
surrogates
4 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
967
views
Comment:
Comment: Tissue-specific DEG analysis with DEseq2
6 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
1.0k
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
6 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.0k
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
6 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
5.0k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
5.0k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
5.0k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
5.0k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
5.0k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
7 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
5.0k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.0k
views
Comment:
Comment: RNA seq differential expression analysis
7 months ago by
BioinfGuru
★ 2.1k
7
votes
13
replies
5.0k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
R
Ubuntu
Linux
Bioconductor
Rstudio
updated 7 months ago by
ATpoint
85k • written 7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.2k
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Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
7 months ago by
BioinfGuru
★ 2.1k
5
votes
4
replies
1.2k
views
DEG analysis of RNA-seq data across multiple tissues and two conditions
RNA-seq
EdgeR
DEGs
DESeq2
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.2k
views
Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
7 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
456
views
Answer:
Answer: gene body coverage with RSeqQC
7 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
542
views
Comment:
Comment: Bioinformatics_where do i start
7 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
7 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.4k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
632
views
Comment:
Comment: what is the normal range of htseq-count output for homo sapiens RNA-Seq
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
979
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
979
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
559
views
Comment:
Comment: Removing batch effect using combat-seq
7 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
559
views
Comment:
Comment: Removing batch effect using combat-seq
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
979
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
979
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
465
views
Answer:
Answer: Tissue specific mRNA expression dataset in human and mouse
7 months ago by
BioinfGuru
★ 2.1k
2
votes
1
reply
970
views
Answer:
Answer: Mapping ortholog human and mouse transcript
7 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
605
views
Comment:
Comment: How do I get the gene annotations as a text file from a genebank file?
7 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
1.6k
views
Comment:
Comment: What is the sequence origin in human plasma?
8 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
392
views
Comment:
Comment: PCA script correction
8 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
904
views
Comment:
Comment: Searching for gene in multiple genomes
8 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.6k
views
Comment:
Comment: What is the sequence origin in human plasma?
8 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
904
views
Answer:
Answer: Searching for gene in multiple genomes
8 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.4k
views
Answer:
Answer: cutadapt not trimming all adapters in PE Illumina sequencing
8 months ago by
BioinfGuru
★ 2.1k
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