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Answer:
Answer: Differential analysis of enrichment results
9 months ago by
BioinfGuru
★ 2.1k
1
vote
1
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1.3k
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Comment:
Comment: Differential analysis of enrichment results
9 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
1.8k
views
Answer:
Answer: Conversion of Gene Name to Ensembl ID
9 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
2.8k
views
Comment:
Comment: Running fastqc in parallel
9 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
890
views
Comment:
Comment: Pathway analysis for DGEList
9 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
890
views
Answer:
Answer: Pathway analysis for DGEList
9 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
293
views
Should I run SVA or not?
Clustering
SVA
Batch
9 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
2.8k
views
Comment:
Comment: Running fastqc in parallel
9 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
481
views
Answer:
Answer: Associations with small-ish patient clinical data with bulk RNA-seq expression
9 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
810
views
Comment:
Comment: Comparing two RNAseq runs for the same samples
9 months ago by
BioinfGuru
★ 2.1k
3
votes
2
replies
2.8k
views
Answer:
Answer: Running fastqc in parallel
9 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
467
views
Comment:
Comment: What does evidence of batch effect in bulk rnaseq look like?
9 months ago by
BioinfGuru
★ 2.1k
2
votes
2
replies
467
views
What does evidence of batch effect in bulk rnaseq look like?
batches
sva
surrogates
9 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.4k
views
Comment:
Comment: Tissue-specific DEG analysis with DEseq2
11 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
1.4k
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
12 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.4k
views
Comment:
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
6.4k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
6.4k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
6.4k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
6.4k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
6.4k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
6.4k
views
Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.3k
views
Comment:
Comment: RNA seq differential expression analysis
12 months ago by
BioinfGuru
★ 2.1k
9
votes
13
replies
6.4k
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
R
Ubuntu
Linux
Bioconductor
Rstudio
updated 12 months ago by
ATpoint
87k • written 12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.8k
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Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
12 months ago by
BioinfGuru
★ 2.1k
5
votes
4
replies
1.8k
views
DEG analysis of RNA-seq data across multiple tissues and two conditions
RNA-seq
EdgeR
DEGs
DESeq2
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.8k
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Comment:
Comment: DEG analysis of RNA-seq data across multiple tissues and two conditions
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.8k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
12 months ago by
BioinfGuru
★ 2.1k
1
vote
0
replies
1.8k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
631
views
Answer:
Answer: gene body coverage with RSeqQC
12 months ago by
BioinfGuru
★ 2.1k
2
votes
0
replies
686
views
Comment:
Comment: Bioinformatics_where do i start
12 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.8k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
12 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.8k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
12 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.8k
views
Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
882
views
Comment:
Comment: what is the normal range of htseq-count output for homo sapiens RNA-Seq
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.3k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
12 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
1.3k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
12 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
744
views
Comment:
Comment: Removing batch effect using combat-seq
13 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
744
views
Comment:
Comment: Removing batch effect using combat-seq
13 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.3k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
13 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.3k
views
Comment:
Comment: Help with summarizeOverlaps function in RNASeq analysis using R
13 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
601
views
Answer:
Answer: Tissue specific mRNA expression dataset in human and mouse
13 months ago by
BioinfGuru
★ 2.1k
2
votes
1
reply
1.6k
views
Answer:
Answer: Mapping ortholog human and mouse transcript
13 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
743
views
Comment:
Comment: How do I get the gene annotations as a text file from a genebank file?
13 months ago by
BioinfGuru
★ 2.1k
0
votes
2
replies
2.2k
views
Comment:
Comment: What is the sequence origin in human plasma?
13 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
512
views
Comment:
Comment: PCA script correction
13 months ago by
BioinfGuru
★ 2.1k
0
votes
0
replies
1.3k
views
Comment:
Comment: Searching for gene in multiple genomes
13 months ago by
BioinfGuru
★ 2.1k
0
votes
1
reply
2.2k
views
Comment:
Comment: What is the sequence origin in human plasma?
13 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
1.3k
views
Answer:
Answer: Searching for gene in multiple genomes
13 months ago by
BioinfGuru
★ 2.1k
1
vote
1
reply
2.2k
views
Answer:
Answer: cutadapt not trimming all adapters in PE Illumina sequencing
13 months ago by
BioinfGuru
★ 2.1k
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