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Comment: Comment: How to extract alignments with 0 mismatch from sam or bam file by using samtools
3.5 years ago by badribio ▴ 290
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Comment: Comment: ComplexHeatmap Package takes forever to plot
3.5 years ago by badribio ▴ 290
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Answer: Answer: How to extract alignments with 0 mismatch from sam or bam file by using samtools
3.5 years ago by badribio ▴ 290
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Answer: Answer: gffcompare class_code "u"
3.5 years ago by badribio ▴ 290
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Answer: Answer: Low Counts with featureCounts
3.5 years ago by badribio ▴ 290
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2.5k
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Comment: Comment: Low Counts with featureCounts
3.5 years ago by badribio ▴ 290
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1.9k
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Answer: Answer: Is Ensembl VEP down right now?
3.5 years ago by badribio ▴ 290
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Comment: Comment: How we can use DEG data for GSEA analysis
3.5 years ago by badribio ▴ 290
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1.1k
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Comment: Comment: What object in GEO2R R code environment to use for ggplot2 Volcano and listing D
3.5 years ago by badribio ▴ 290
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1.1k
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Comment: C: What object in GEO2R R code environment to use for ggplot2 Volcano and listing D
3.8 years ago by badribio ▴ 290
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1.2k
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Comment: C: Fasta and csv file reforamting
3.8 years ago by badribio ▴ 290
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Answer: A: How to download mm10 GTF file with the gene id and gene name using UCSC table br
updated 4.9 years ago by 24k • written 4.9 years ago by ▴ 290
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991
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Comment: C: Does input rna concentration change expressions analysis?
5.6 years ago by badribio ▴ 290
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991
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Does input rna concentration change expressions analysis?
RNA-Seq
updated 5.6 years ago by 14k • written 5.6 years ago by ▴ 290
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1.4k
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best way to find downstream effects of insertion
frameshift splicing
updated 5.9 years ago by 20 • written 8.0 years ago by ▴ 290
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1.9k
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Comment: C: Computational Scientist - Finucane Lab (4943)
6.8 years ago by badribio ▴ 290
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3.1k
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Comment: C: Error While running Hisat2: extract_splice_sites.py
6.8 years ago by badribio ▴ 290
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8.5k
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Comment: C: Qiime file for Krona pie chart?
6.9 years ago by badribio ▴ 290
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1.8k
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Comment: C: How to use spliceR to run stringtie results
7.1 years ago by badribio ▴ 290
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14
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4.4k
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genomic range overlap using pandas memory issue
pandas python gene
updated 7.1 years ago by 20 • written 7.6 years ago by ▴ 290
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23k
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Comment: C: what do the headers of the rMATS output files mean?
7.2 years ago by badribio ▴ 290
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40
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7.3k
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weird insert size post trimming
RNA-Seq
updated 7.2 years ago by ★ 2.9k • written 7.3 years ago by ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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1
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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7.3k
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Comment: C: weird insert size post trimming
7.3 years ago by badribio ▴ 290
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2.5k
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Comment: A: [DESeq2] Time-Course Experimental design
7.3 years ago by badribio ▴ 290
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0
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5.9k
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Answer: A: Removing reads shorter than 10kb from FASTQ files
7.4 years ago by badribio ▴ 290
1
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0
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6.7k
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Comment: C: Using StringTie with DESeq2(StringTie geneID and corresponding Ensembl geneID)
7.4 years ago by badribio ▴ 290
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0
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4.7k
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Comment: C: Hisat2 warning: skipping mate
7.4 years ago by badribio ▴ 290
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0
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8.1k
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Comment: C: 10x Supernova de novo assembly
7.4 years ago by badribio ▴ 290
0
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2
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8.5k
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Comment: C: Qiime file for Krona pie chart?
7.4 years ago by badribio ▴ 290
0
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0
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2.5k
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Comment: C: DEXseq alternative splicing detection
7.4 years ago by badribio ▴ 290
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0
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2.7k
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Answer: C: Alternative Splicing detection
7.4 years ago by badribio ▴ 290
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1
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3.1k
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Comment: C: Add gene names for significant genes in volcano plot (CummeRbund)
7.4 years ago by badribio ▴ 290
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1
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3.3k
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Comment: C: Detecting Structural variants in sequencing data
7.4 years ago by badribio ▴ 290
1
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0
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2.1k
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HISAT2 new release --avoid-pseudogene
RNA-Seq hisat2
7.5 years ago by badribio ▴ 290
99 results • Page 1 of 2
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