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how to use a chromosome scale reference genome to place scaffold of a closely related species
chromosome scaffold to
updated 2.6 years ago by 55k • written 2.6 years ago by ▴ 40
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1.7k
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Comment: Comment: Extracting genes coded by a region of a chromosome
2.6 years ago by nagarsaggi ▴ 40
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1.7k
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Comment: Comment: Extracting genes coded by a region of a chromosome
2.6 years ago by nagarsaggi ▴ 40
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1
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1.7k
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Comment: Comment: Extracting genes coded by a region of a chromosome
2.7 years ago by nagarsaggi ▴ 40
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1
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1.7k
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Comment: Comment: Extracting genes coded by a region of a chromosome
2.7 years ago by nagarsaggi ▴ 40
3
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8
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1.7k
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Extracting genes coded by a region of a chromosome
gene sequnce extration
updated 2.6 years ago by 150k • written 2.7 years ago by ▴ 40
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1
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550
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Extracting variants from genic region
snp
updated 3.1 years ago by 166k • written 3.1 years ago by ▴ 40
6
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3
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5.6k
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how to estimate heterozygosity by sample from a multi-sample vcf file
snp
updated 5.1 years ago by ★ 1.9k • written 5.1 years ago by ▴ 40
2
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1
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1.6k
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How could I get population or individual specific genotypes from multi sample VCF file
snp
5.4 years ago by nagarsaggi ▴ 40
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0
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7.2k
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Comment: C: sorting a multi-sample (genotype) vcf file
5.4 years ago by nagarsaggi ▴ 40
8
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7
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7.2k
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sorting a multi-sample (genotype) vcf file
SNP
updated 3.8 years ago by • 0 • written 5.4 years ago by ▴ 40
14
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16
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16k
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how to count variants par sample per chromosome in a vcf file?
snp
updated 4.0 years ago by 45k • written 6.6 years ago by ▴ 40
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1.5k
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Comparing the size of assemblies, contiguity and busco stats of multiple isolates genome
Assembly
updated 6.1 years ago by ★ 1.7k • written 6.1 years ago by ▴ 40
1
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1
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1.7k
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Getting consensus fasta sequence for a chromosome from a bam file
alignment
updated 6.5 years ago by 16k • written 6.5 years ago by ▴ 40
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0
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16k
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Comment: C: how to count variants par sample per chromosome in a vcf file?
6.6 years ago by nagarsaggi ▴ 40
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0
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18k
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Comment: C: Plotting SNP density along a chromosome from VCF files
6.6 years ago by nagarsaggi ▴ 40
0
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2
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16k
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Comment: C: how to count variants by chromosome in a vcf file?
6.6 years ago by nagarsaggi ▴ 40
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