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Answer: Answer: Chromosome bias on RNA-Seq differential gene expression analysis
14 months ago by Charles Murtaugh ▴ 50
0
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555
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Making use of relative density of genomic features between gene sets
distributions weighting genomics
updated 17 months ago by 20k • written 17 months ago by ▴ 50
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1
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676
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using GRanges metadata to constrain overlap searches between objects
plyranges Bioconductor GRanges R GenomicRanges
updated 20 months ago by 11k • written 20 months ago by ▴ 50
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1.0k
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Comment: Comment: method for querying gnomAD with long list of "uncharacterized" variants
21 months ago by Charles Murtaugh ▴ 50
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3
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1.0k
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method for querying gnomAD with long list of "uncharacterized" variants
R gnomAD variant GenomicRanges
updated 21 months ago by 44k • written 21 months ago by ▴ 50
6
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3
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1.3k
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is the lowest numbered Ensembl transcript ID always the "canonical" transcript?
transcript ensembl bioconductor r
updated 3.0 years ago by 24k • written 3.0 years ago by ▴ 50
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2.1k
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Comment: Comment: trying to make nice-looking plot of gene structure with mutations
3.1 years ago by Charles Murtaugh ▴ 50
2
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2.1k
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trying to make nice-looking plot of gene structure with mutations
ggbio genome mutation visualization r
3.1 years ago by Charles Murtaugh ▴ 50
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1.2k
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Comment: Comment: question about Mutation Annotation Format (MAF) variant classifications
3.3 years ago by Charles Murtaugh ▴ 50
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2
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1.2k
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question about Mutation Annotation Format (MAF) variant classifications
annotation ICGC MAF R
3.3 years ago by Charles Murtaugh ▴ 50
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2
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2.3k
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Odd output from FastQC
RNA-Seq fastqc
8.3 years ago by Charles Murtaugh ▴ 50
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0
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2.3k
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Comment: A: Odd output from FastQC
8.3 years ago by Charles Murtaugh ▴ 50
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