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5
votes
19
replies
4.6k
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8 follow
Hisat2 aligner problem
RNA-Seq ChIP-Seq alignment Assembly software error
updated 11 months ago by 85k • written 5.5 years ago by ▴ 350
0
votes
0
replies
579
views
Comment: Comment: Exon skipping AS pipeline
2.1 years ago by ta_awwad ▴ 350
1
vote
2
replies
579
views
Exon skipping AS pipeline
splicing RNA-Seq Alternative
2.1 years ago by ta_awwad ▴ 350
0
votes
1
reply
711
views
DEXseq batch effect removal error
RNA-Seq DEXseq R DEseq2
updated 2.1 years ago by ★ 1.8k • written 2.1 years ago by ▴ 350
0
votes
1
reply
1.6k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
2.2 years ago by ta_awwad ▴ 350
0
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0
replies
1.6k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
2.3 years ago by ta_awwad ▴ 350
0
votes
0
replies
1.6k
views
Comment: Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
2.3 years ago by ta_awwad ▴ 350
1
vote
5
replies
1.6k
views
DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"CompressedIntegerList"’
DEXSeq R Bioconductor
updated 2.0 years ago by ▴ 130 • written 2.3 years ago by ▴ 350
1
vote
1
reply
4.4k
views
Answer: Answer: How to select differential expressed genes using DeSeq2?
2.6 years ago by ta_awwad ▴ 350
0
votes
0
replies
711
views
Comment: Comment: find peaks over a set of genes
2.8 years ago by ta_awwad ▴ 350
2
votes
2
replies
711
views
find peaks over a set of genes
ChIP-seq R RNA-Seq
2.8 years ago by ta_awwad ▴ 350
0
votes
0
replies
495
views
Sankey plot for bulk RNA-seq
DEseq2 RNA-Seq R
3.1 years ago by ta_awwad ▴ 350
0
votes
0
replies
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
6
votes
16
replies
1.8k
views
Motif match chip-seq peaks
ChIP-Seq sequencing
updated 4.8 years ago by 85k • written 4.8 years ago by ▴ 350
0
votes
0
replies
1.8k
views
Comment: C: Motif match chip-seq peaks
4.8 years ago by ta_awwad ▴ 350
1
vote
1
reply
801
views
how to get RNA-binding proteins in mouse
RNA-Seq ChIP-Seq CLIP-seq proteomics
4.8 years ago by ta_awwad ▴ 350
14
votes
12
replies
6.5k
views
ATAC-seq 150bp reads
next-gen ATAC-seq ChIP-Seq sequencing
updated 4.8 years ago by 13k • written 4.8 years ago by ▴ 350
0
votes
0
replies
6.5k
views
Comment: C: ATAC-seq 150bp reads
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
6.5k
views
Comment: C: ATAC-seq 150bp reads
4.8 years ago by ta_awwad ▴ 350
0
votes
0
replies
6.5k
views
Comment: C: ATAC-seq 150bp reads
4.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
6.5k
views
Comment: C: ATAC-seq 150bp reads
4.8 years ago by ta_awwad ▴ 350
0
votes
0
replies
8.9k
views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
4.9 years ago by ta_awwad ▴ 350
0
votes
0
replies
4.8k
views
Comment: C: Allele Specific Expression Analysis
5.0 years ago by ta_awwad ▴ 350
0
votes
1
reply
8.9k
views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
5.0 years ago by ta_awwad ▴ 350
0
votes
1
reply
4.8k
views
Comment: A: Allele Specific Expression Analysis
5.0 years ago by ta_awwad ▴ 350
0
votes
0
replies
4.6k
views
Comment: C: Hisat2 aligner problem
5.4 years ago by ta_awwad ▴ 350
0
votes
1
reply
4.6k
views
Comment: C: Hisat2 aligner problem
5.5 years ago by ta_awwad ▴ 350
0
votes
1
reply
4.6k
views
Comment: C: Hisat2 aligner problem
5.5 years ago by ta_awwad ▴ 350
0
votes
0
replies
4.6k
views
Comment: C: Hisat2 aligner problem
5.5 years ago by ta_awwad ▴ 350
0
votes
1
reply
4.6k
views
Comment: C: Hisat2 aligner problem
5.5 years ago by ta_awwad ▴ 350
0
votes
1
reply
4.6k
views
Comment: C: Hisat2 aligner problem
5.5 years ago by ta_awwad ▴ 350
0
votes
1
reply
4.6k
views
Comment: C: Hisat2 aligner problem
5.5 years ago by ta_awwad ▴ 350
0
votes
0
replies
1.4k
views
Comment: C: 4Cseqpipe for long-range interaction
5.7 years ago by ta_awwad ▴ 350
0
votes
2
replies
1.4k
views
4Cseqpipe for long-range interaction
R chromosome conformation captur Assembly genome
5.7 years ago by ta_awwad ▴ 350
0
votes
0
replies
3.0k
views
Comment: C: Filter Fastq file by seq
5.8 years ago by ta_awwad ▴ 350
0
votes
1
reply
3.0k
views
Comment: C: Filter Fastq file by seq
5.8 years ago by ta_awwad ▴ 350
9
votes
5
replies
3.0k
views
Filter Fastq file by seq
NGS Python R Bioconductor
5.8 years ago by ta_awwad ▴ 350
0
votes
0
replies
1.9k
views
Comment: C: RIblast output Circos plot
5.8 years ago by ta_awwad ▴ 350
1
vote
2
replies
1.9k
views
Comment: C: RIblast output Circos plot
5.8 years ago by ta_awwad ▴ 350
3
votes
7
replies
1.9k
views
RIblast output Circos plot
R RIblast circos
updated 5.8 years ago by ▴ 370 • written 5.8 years ago by ▴ 350
0
votes
0
replies
1.9k
views
Comment: C: RIblast output Circos plot
5.8 years ago by ta_awwad ▴ 350
2
votes
0
replies
6.6k
views
Answer: A: Convert bed12 to GFF
6.3 years ago by ta_awwad ▴ 350
4
votes
3
replies
1.3k
views
where to find hg38 CDS without UTRs
RNA-Seq genome assembly alignment
updated 6.3 years ago by 147k • written 6.3 years ago by ▴ 350
8
votes
12
replies
2.2k
views
can lnc-RNA target coding RNA?
RNA lnc-RNA mRNA
updated 6.3 years ago by 7.6k • written 6.4 years ago by ▴ 350
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