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Protein secuence extraction from gpff file for a genes list
Protein gpff
updated 7 weeks ago by 13k • written 7 weeks ago by ▴ 300
0
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2
replies
483
views
number of SNPs per sample in multi-sample VCF file
VCF bcftools
updated 4 months ago by ★ 2.9k • written 4 months ago by ▴ 300
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1
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482
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Integration of paired and single-end SRA
Paired-end Single-end VCF Resequencing
updated 6 months ago by 20k • written 6 months ago by ▴ 300
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0
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771
views
Comment: Comment: merge overlaps and remove non overlap genomic windows
10 months ago by reza ▴ 300
0
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1
reply
771
views
Comment: Comment: merge overlaps and remove non overlap genomic windows
10 months ago by reza ▴ 300
0
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4
replies
771
views
merge overlaps and remove non overlap genomic windows
BED intersection overlap
10 months ago by reza ▴ 300
0
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0
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960
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Comment: Comment: VCF conservation into Treemix
15 months ago by reza ▴ 300
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0
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2.1k
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Comment: Comment: BWA Index Referencing Failed. Possible Reason and Solutions?
15 months ago by reza ▴ 300
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0
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628
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bootstraped treemix show no migration event
Treemix Bootstrap
15 months ago by reza ▴ 300
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2
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960
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VCF conservation into Treemix
Treemix Plink VCF
15 months ago by reza ▴ 300
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0
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1.2k
views
Comment: Comment: how to filter a multi-sample VCF file based on 0/0 genotype numbers
19 months ago by reza ▴ 300
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1
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1.2k
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Comment: Comment: how to filter a multi-sample VCF file based on 0/0 genotype numbers
19 months ago by reza ▴ 300
2
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4
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1.2k
views
how to filter a multi-sample VCF file based on 0/0 genotype numbers
genotype VCF CNV
19 months ago by reza ▴ 300
0
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2
replies
1.5k
views
pooled-heterozygosity calculation
VCF Population-Genetics WGS Selective-sweep
updated 22 months ago by • 0 • written 3.5 years ago by ▴ 300
0
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1
reply
1.0k
views
Prolem with Dsuite program for introgression test
Introgression Dsuite
updated 2.3 years ago by • 0 • written 2.6 years ago by ▴ 300
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0
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529
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How to determine a threshold for fdm parameter to identify introgressed regions on genome
WGS Introgression Dsuite
2.6 years ago by reza ▴ 300
0
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1
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1.1k
views
ERROR: Variant physical position must be monotonically increasing
XPEHH selscan
updated 3.3 years ago by 4.7k • written 3.3 years ago by ▴ 300
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0
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831
views
different windows and snps for same vcf file while i calculate genetic diversity using vcftools
vcftools pi
3.3 years ago by reza ▴ 300
0
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0
replies
502
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Pooled-heterozigosity (SECTION2)
Hp VCF Pooled_Heterozygosity
3.4 years ago by reza ▴ 300
0
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0
replies
1.7k
views
Comment: Comment: Annotation of vcftools fst output using GTF or GFF
3.4 years ago by reza ▴ 300
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1
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1.7k
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Comment: Comment: Annotation of vcftools fst output using GTF or GFF
3.4 years ago by reza ▴ 300
2
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4
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1.7k
views
Annotation of vcftools fst output using GTF or GFF
fst vcftools annotation GTF
3.4 years ago by reza ▴ 300
1
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1
reply
3.8k
views
Comment: Comment: Bam file depth of coverage and statstics
3.4 years ago by reza ▴ 300
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1
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3.8k
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Comment: Comment: Bam file depth of coverage and statstics
3.4 years ago by reza ▴ 300
0
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0
replies
4.7k
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Comment: Comment: GATK-Allele frequency
3.4 years ago by reza ▴ 300
0
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1
reply
3.8k
views
Comment: Comment: Bam file depth of coverage and statstics
3.4 years ago by reza ▴ 300
1
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1
reply
2.4k
views
Comment: Comment: ABBA BABA test for two population
3.5 years ago by reza ▴ 300
1
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4
replies
2.4k
views
ABBA BABA test for two population
introgression genetics Population ABAB-BABA
updated 3.5 years ago by ▴ 130 • written 3.5 years ago by ▴ 300
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0
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1.5k
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Comment: Comment: How to filter GATK vcf file using other programs
3.6 years ago by reza ▴ 300
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1
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1.5k
views
Comment: Comment: How to filter GATK vcf file using other programs
3.6 years ago by reza ▴ 300
0
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4
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1.5k
views
How to filter GATK vcf file using other programs
VCF Filtration GATK
3.6 years ago by reza ▴ 300
1
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1
reply
1.6k
views
Adding read groups to mark duplicated bam file
Picard GATK
updated 3.6 years ago by ★ 1.2k • written 3.6 years ago by ▴ 300
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0
replies
2.2k
views
Comment: Comment: how to removed the first two nucleotides from a fastq file (single-end)
3.9 years ago by reza ▴ 300
1
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0
replies
1.9k
views
Comment: Comment: Problem with limma in microarray analysis
3.9 years ago by reza ▴ 300
0
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1
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1.9k
views
Comment: Comment: Problem with limma in microarray analysis
3.9 years ago by reza ▴ 300
0
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1
reply
1.9k
views
Comment: Comment: Problem with limma in microarray analysis
3.9 years ago by reza ▴ 300
5
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6
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1.9k
views
Problem with limma in microarray analysis
limma microarray R
3.9 years ago by reza ▴ 300
1
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7
replies
15k
views
A problem with download SRA using SRA toolkit
SRAtoolkit NCBI SRA
updated 21 months ago by 45k • written 5.1 years ago by ▴ 300
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1
reply
2.4k
views
Comment: Comment: big loss after markduplication
4.0 years ago by reza ▴ 300
0
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0
replies
2.4k
views
Comment: Comment: big loss after markduplication
4.0 years ago by reza ▴ 300
0
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0
replies
2.4k
views
Comment: Comment: big loss after markduplication
4.0 years ago by reza ▴ 300
0
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1
reply
2.4k
views
Comment: Comment: big loss after markduplication
4.0 years ago by reza ▴ 300
0
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1
reply
2.4k
views
Comment: Comment: big loss after markduplication
4.0 years ago by reza ▴ 300
1
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10
replies
2.4k
views
big loss after markduplication
MarkDuplicates Re-sequencing Picard
updated 4.0 years ago by ▴ 170 • written 4.0 years ago by ▴ 300
1
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1
reply
930
views
variant calling using masked reference genome
Bowtie2 Reference Genome Variant Calling
4.1 years ago by reza ▴ 300
0
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1
reply
1.9k
views
Comment: C: error in running Combat function
4.3 years ago by reza ▴ 300
0
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1
reply
1.9k
views
Comment: C: error in running Combat function
4.3 years ago by reza ▴ 300
0
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1
reply
1.9k
views
Comment: C: error in running Combat function
4.3 years ago by reza ▴ 300
0
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6
replies
1.9k
views
error in running Combat function
R sva Combat R studio
4.3 years ago by reza ▴ 300
0
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0
replies
825
views
Meta-Analysis of Microarray data (Afyymetrix)
Meta-Analysis Microarray Affymetrix R
4.7 years ago by reza ▴ 300
159 results • Page 1 of 4
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