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Comment: C: Functional annotation of SNPs and genes containing nonsynonymous SNPs
7.4 years ago by reza ▴ 300
0
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1
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3.2k
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Comment: C: Functional annotation of SNPs and genes containing nonsynonymous SNPs
7.4 years ago by reza ▴ 300
6
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6
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3.2k
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Functional annotation of SNPs and genes containing nonsynonymous SNPs
SNP gene next-gen ns SNPs indel
7.4 years ago by reza ▴ 300
1
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0
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4.1k
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Answer: A: number of functions is more than namber of variants in snpEff's output
7.5 years ago by reza ▴ 300
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0
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2.8k
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Comment: C: Finding ORF from a genome with a partial nucleotide sequence
7.5 years ago by reza ▴ 300
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1
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3.4k
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Comment: C: how to estimate mean and standard deviation read depth for all the variants?
7.6 years ago by reza ▴ 300
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1
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3.4k
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Comment: C: how to estimate mean and standard deviation read depth for all the variants?
7.6 years ago by reza ▴ 300
5
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5
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3.4k
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how to estimate mean and standard deviation read depth for all the variants?
SNP next-gen depth of coverage
7.6 years ago by reza ▴ 300
5
votes
2
replies
7.3k
views
how to select longest isoform per gene in gtf
gene GTF annotation
updated 7.6 years ago by ★ 2.7k • written 7.6 years ago by ▴ 300
5
votes
6
replies
2.1k
views
ftp downloding error
ftp next-gen
updated 7.6 years ago by 20 • written 7.7 years ago by ▴ 300
0
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1
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4.1k
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Comment: C: number of functions is more than namber of variants in snpEff's output
7.7 years ago by reza ▴ 300
0
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1
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4.1k
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Comment: C: number of functions is more than namber of variants in snpEff's output
7.7 years ago by reza ▴ 300
0
votes
1
reply
4.1k
views
Comment: C: number of functions is more than namber of variants in snpEff's output
7.7 years ago by reza ▴ 300
0
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4
replies
6.8k
views
building database in snpEff
software error snpEff snp
updated 7.7 years ago by 20 • written 7.7 years ago by ▴ 300
0
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0
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2.1k
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Comment: C: ftp downloding error
7.7 years ago by reza ▴ 300
0
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1
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2.1k
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Comment: C: ftp downloding error
7.7 years ago by reza ▴ 300
6
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6
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3.4k
views
variant calling after mapping via bwa mem
next-gen snp alignment
updated 7.8 years ago by ★ 1.6k • written 7.9 years ago by ▴ 300
2
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0
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2.7k
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Comment: C: finding repeats in de-novo assembled contig from PacBio reads
7.8 years ago by reza ▴ 300
0
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0
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4.8k
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Comment: C: SNP annotation using gff3
7.8 years ago by reza ▴ 300
0
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8
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4.8k
views
SNP annotation using gff3
SNP sequencing next-gen
updated 7.9 years ago by ★ 5.0k • written 7.9 years ago by ▴ 300
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0
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4.8k
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Comment: C: SNP annotation using gff3
7.9 years ago by reza ▴ 300
0
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1
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4.8k
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Answer: A: SNP annotation using gff3
7.9 years ago by reza ▴ 300
4
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1
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6.0k
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Comment: C: Problems with Trimmomatic PE output files
7.9 years ago by reza ▴ 300
0
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1
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4.0k
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Comment: C: workflow for variant calling using GATK in multiple paired end reads
7.9 years ago by reza ▴ 300
0
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1
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3.4k
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Comment: C: variant calling after mapping via bwa mem
7.9 years ago by reza ▴ 300
0
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0
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3.8k
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Answer: A: beginner question BWA program
7.9 years ago by reza ▴ 300
2
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5
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3.8k
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beginner question BWA program
genome alignment
7.9 years ago by reza ▴ 300
2
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3
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2.7k
views
Trimmomatic for RNA-seq or Whole genome seuencing or for both?
next-gen sequencing
updated 7.9 years ago by ★ 5.0k • written 7.9 years ago by ▴ 300
0
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1
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3.8k
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Comment: C: beginner question BWA program
7.9 years ago by reza ▴ 300
1
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3
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2.0k
views
SNP annotation in non model animals
SNP next-gen
updated 7.9 years ago by 20 • written 8.0 years ago by ▴ 300
0
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1
reply
3.0k
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Augustus running error
software error next-gen
8.0 years ago by reza ▴ 300
1
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0
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3.4k
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Answer: A: quality read software
8.0 years ago by reza ▴ 300
0
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0
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2.0k
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Comment: C: SNP annotation in non model animals
8.0 years ago by reza ▴ 300
0
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2
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1.3k
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publication of trial software
next-gen Assembly
updated 8.1 years ago by 20 • written 8.2 years ago by ▴ 300
0
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1
reply
2.6k
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Comment: C: CLC worcbench assembly
8.1 years ago by reza ▴ 300
2
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5
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2.6k
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CLC worcbench assembly
Assembly next-gen
updated 8.1 years ago by 5.9k • written 8.1 years ago by ▴ 300
1
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4
replies
2.2k
views
installing ABYSS using cygwin
abyss assembly
updated 8.2 years ago by 8.3k • written 8.2 years ago by ▴ 300
0
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1
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2.2k
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Comment: C: installing ABYSS using cygwin
8.2 years ago by reza ▴ 300
0
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1
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1.9k
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Comment: C: running SOAP using 32G RAM
8.2 years ago by reza ▴ 300
0
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6
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1.9k
views
running SOAP using 32G RAM
Assembly next-gen
updated 8.2 years ago by ★ 1.5k • written 8.2 years ago by ▴ 300
0
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0
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1.3k
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Comment: C: publication of trial software
8.2 years ago by reza ▴ 300
2
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2
replies
2.3k
views
samtools/bcftools gave me no variant, why!?
software error snp
updated 8.2 years ago by ★ 3.8k • written 8.2 years ago by ▴ 300
1
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3
replies
3.4k
views
Tutorial: resolving error of sspace_standard
software-error Assembly
updated 19 months ago by 44k • written 8.2 years ago by ▴ 300
2
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1
reply
5.0k
views
Answer: A: Unequal paired-end fastq size after quality control
8.2 years ago by reza ▴ 300
3
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4
replies
1.8k
views
scoffold level assembly
Assembly next-gen
updated 8.2 years ago by ▴ 80 • written 8.3 years ago by ▴ 300
0
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1
reply
2.1k
views
help request for running SOAPdenovo
Assembly
updated 8.3 years ago by 5.3k • written 8.3 years ago by ▴ 300
0
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0
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2.6k
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Comment: C: cygwin error when i try to install platypus (variant caller)
8.3 years ago by reza ▴ 300
0
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3
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2.6k
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cygwin error when i try to install platypus (variant caller)
software error SNP
8.3 years ago by reza ▴ 300
0
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2
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1.4k
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Comment: C: assemble in chromosome level for first time
8.3 years ago by reza ▴ 300
3
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5
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1.4k
views
assemble in chromosome level for first time
Assembly next-gen
updated 8.3 years ago by 13k • written 8.3 years ago by ▴ 300
157 results • Page 3 of 4
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