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Comment: C: building database in snpEff
8.0 years ago by reza ▴ 300
0
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0
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8.5k
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Comment: C: How to determine percentage missing genotypes in VCF/BCF?
8.0 years ago by reza ▴ 300
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0
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3.5k
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Comment: C: Functional annotation of SNPs and genes containing nonsynonymous SNPs
8.0 years ago by reza ▴ 300
0
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0
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3.5k
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Comment: C: Functional annotation of SNPs and genes containing nonsynonymous SNPs
8.0 years ago by reza ▴ 300
0
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1
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3.5k
views
Comment: C: Functional annotation of SNPs and genes containing nonsynonymous SNPs
8.0 years ago by reza ▴ 300
6
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6
replies
3.5k
views
Functional annotation of SNPs and genes containing nonsynonymous SNPs
SNP gene next-gen ns SNPs indel
8.0 years ago by reza ▴ 300
1
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0
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4.6k
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Answer: A: number of functions is more than namber of variants in snpEff's output
8.1 years ago by reza ▴ 300
0
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0
replies
3.1k
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Comment: C: Finding ORF from a genome with a partial nucleotide sequence
8.1 years ago by reza ▴ 300
1
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1
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3.6k
views
Comment: C: how to estimate mean and standard deviation read depth for all the variants?
8.1 years ago by reza ▴ 300
1
vote
1
reply
3.6k
views
Comment: C: how to estimate mean and standard deviation read depth for all the variants?
8.1 years ago by reza ▴ 300
5
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5
replies
3.6k
views
how to estimate mean and standard deviation read depth for all the variants?
SNP next-gen depth of coverage
8.1 years ago by reza ▴ 300
5
votes
2
replies
7.5k
views
how to select longest isoform per gene in gtf
gene GTF annotation
updated 8.1 years ago by ★ 2.7k • written 8.1 years ago by ▴ 300
5
votes
6
replies
2.3k
views
ftp downloding error
ftp next-gen
updated 8.1 years ago by 20 • written 8.3 years ago by ▴ 300
0
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1
reply
4.6k
views
Comment: C: number of functions is more than namber of variants in snpEff's output
8.2 years ago by reza ▴ 300
0
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1
reply
4.6k
views
Comment: C: number of functions is more than namber of variants in snpEff's output
8.2 years ago by reza ▴ 300
0
votes
1
reply
4.6k
views
Comment: C: number of functions is more than namber of variants in snpEff's output
8.2 years ago by reza ▴ 300
0
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4
replies
7.1k
views
building database in snpEff
software error snpEff snp
updated 8.2 years ago by 20 • written 8.3 years ago by ▴ 300
0
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0
replies
2.3k
views
Comment: C: ftp downloding error
8.3 years ago by reza ▴ 300
0
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1
reply
2.3k
views
Comment: C: ftp downloding error
8.3 years ago by reza ▴ 300
6
votes
6
replies
3.7k
views
variant calling after mapping via bwa mem
next-gen snp alignment
updated 8.4 years ago by ★ 1.6k • written 8.5 years ago by ▴ 300
2
votes
0
replies
2.9k
views
Comment: C: finding repeats in de-novo assembled contig from PacBio reads
8.4 years ago by reza ▴ 300
0
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0
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5.2k
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Comment: C: SNP annotation using gff3
8.4 years ago by reza ▴ 300
0
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8
replies
5.2k
views
SNP annotation using gff3
SNP sequencing next-gen
updated 8.4 years ago by ★ 5.0k • written 8.4 years ago by ▴ 300
0
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0
replies
5.2k
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Comment: C: SNP annotation using gff3
8.4 years ago by reza ▴ 300
0
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1
reply
5.2k
views
Answer: A: SNP annotation using gff3
8.4 years ago by reza ▴ 300
4
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1
reply
6.3k
views
Comment: C: Problems with Trimmomatic PE output files
8.4 years ago by reza ▴ 300
0
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1
reply
4.3k
views
Comment: C: workflow for variant calling using GATK in multiple paired end reads
8.5 years ago by reza ▴ 300
0
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1
reply
3.7k
views
Comment: C: variant calling after mapping via bwa mem
8.5 years ago by reza ▴ 300
2
votes
5
replies
4.0k
views
beginner question BWA program
genome alignment
8.5 years ago by reza ▴ 300
0
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0
replies
4.0k
views
Answer: A: beginner question BWA program
8.5 years ago by reza ▴ 300
2
votes
3
replies
2.9k
views
Trimmomatic for RNA-seq or Whole genome seuencing or for both?
next-gen sequencing
updated 8.5 years ago by ★ 5.0k • written 8.5 years ago by ▴ 300
0
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1
reply
4.0k
views
Comment: C: beginner question BWA program
8.5 years ago by reza ▴ 300
1
vote
3
replies
2.1k
views
SNP annotation in non model animals
SNP next-gen
updated 8.5 years ago by 20 • written 8.6 years ago by ▴ 300
0
votes
1
reply
3.1k
views
Augustus running error
software error next-gen
8.5 years ago by reza ▴ 300
1
vote
0
replies
4.3k
views
Answer: A: quality read software
8.6 years ago by reza ▴ 300
0
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0
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2.1k
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Comment: C: SNP annotation in non model animals
8.6 years ago by reza ▴ 300
0
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2
replies
1.4k
views
publication of trial software
next-gen Assembly
updated 8.6 years ago by 20 • written 8.8 years ago by ▴ 300
0
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1
reply
3.0k
views
Comment: C: CLC worcbench assembly
8.7 years ago by reza ▴ 300
2
votes
5
replies
3.0k
views
CLC worcbench assembly
Assembly next-gen
updated 8.7 years ago by 5.9k • written 8.7 years ago by ▴ 300
1
vote
4
replies
2.4k
views
installing ABYSS using cygwin
abyss assembly
updated 8.8 years ago by 8.3k • written 8.8 years ago by ▴ 300
0
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1
reply
2.4k
views
Comment: C: installing ABYSS using cygwin
8.8 years ago by reza ▴ 300
0
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1
reply
2.1k
views
Comment: C: running SOAP using 32G RAM
8.8 years ago by reza ▴ 300
0
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6
replies
2.1k
views
running SOAP using 32G RAM
Assembly next-gen
updated 8.8 years ago by ★ 1.5k • written 8.8 years ago by ▴ 300
0
votes
0
replies
1.4k
views
Comment: C: publication of trial software
8.8 years ago by reza ▴ 300
2
votes
2
replies
2.4k
views
samtools/bcftools gave me no variant, why!?
software error snp
updated 8.8 years ago by ★ 3.8k • written 8.8 years ago by ▴ 300
1
vote
3
replies
3.5k
views
Tutorial: resolving error of sspace_standard
software-error Assembly
updated 2.2 years ago by 45k • written 8.8 years ago by ▴ 300
2
votes
1
reply
5.7k
views
Answer: A: Unequal paired-end fastq size after quality control
8.8 years ago by reza ▴ 300
3
votes
4
replies
2.0k
views
scoffold level assembly
Assembly next-gen
updated 8.8 years ago by ▴ 80 • written 8.9 years ago by ▴ 300
0
votes
1
reply
2.2k
views
help request for running SOAPdenovo
Assembly
updated 8.8 years ago by 5.3k • written 8.8 years ago by ▴ 300
0
votes
0
replies
2.8k
views
Comment: C: cygwin error when i try to install platypus (variant caller)
8.8 years ago by reza ▴ 300
160 results • Page 3 of 4
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