Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
322
views
Comment: Comment: How to perform corrected Cell Barcode/UMI calling with an externally sorted BAM?
8 days ago by dsull ★ 6.9k
1
vote
0
replies
551
views
Comment: Comment: Pre-pseudoalignment preprocessing
10 days ago by dsull ★ 6.9k
1
vote
1
reply
446
views
Comment: Comment: alignment to human transcriptome with Bowtie2
27 days ago by dsull ★ 6.9k
0
votes
0
replies
668
views
Comment: Comment: How the field has changed in the last 5 years, and 25 years (up to 2024)
4 weeks ago by dsull ★ 6.9k
1
vote
0
replies
617
views
Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
4 weeks ago by dsull ★ 6.9k
0
votes
1
reply
1.1k
views
Comment: Comment: How to determine whether it is 10x data
4 weeks ago by dsull ★ 6.9k
3
votes
2
replies
617
views
Answer: Answer: How to handle RNA seq data with unbalanced % rRNA by group?
5 weeks ago by dsull ★ 6.9k
0
votes
0
replies
541
views
Comment: Comment: How to count the number and proportion of different barcode combinations in DNA
updated 6 weeks ago by 44k • written 6 weeks ago by ★ 6.9k
1
vote
0
replies
323
views
Comment: Comment: Help With Sleuth
7 weeks ago by dsull ★ 6.9k
0
votes
0
replies
617
views
Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
7 weeks ago by dsull ★ 6.9k
2
votes
0
replies
362
views
Answer: Answer: How far pangenome from being the mainstream?
8 weeks ago by dsull ★ 6.9k
0
votes
1
reply
617
views
Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
8 weeks ago by dsull ★ 6.9k
0
votes
1
reply
617
views
Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
8 weeks ago by dsull ★ 6.9k
1
vote
1
reply
516
views
Comment: Comment: Problem while using Tophat 2.1.0 to search gene fusions
8 weeks ago by dsull ★ 6.9k
1
vote
1
reply
695
views
Answer: Answer: Salmon quantification not as expected; "versionInfo.json doesn't seem to exist"
9 weeks ago by dsull ★ 6.9k
0
votes
0
replies
585
views
Comment: Comment: What should I do if death cell counts and types biologically important in my sin
9 weeks ago by dsull ★ 6.9k
0
votes
0
replies
623
views
Comment: Comment: Chromium 5’ Next GEM single cell STARsolo
9 weeks ago by dsull ★ 6.9k
0
votes
0
replies
1.0k
views
Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
10 weeks ago by dsull ★ 6.9k
0
votes
0
replies
623
views
Comment: Comment: Chromium 5’ Next GEM single cell STARsolo
10 weeks ago by dsull ★ 6.9k
0
votes
1
reply
623
views
Answer: Answer: Chromium 5’ Next GEM single cell STARsolo
10 weeks ago by dsull ★ 6.9k
0
votes
1
reply
1.0k
views
Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
10 weeks ago by dsull ★ 6.9k
1
vote
0
replies
430
views
Comment: Comment: Unaligned rRNA in RNAseq in balb/cj mouse
11 weeks ago by dsull ★ 6.9k
1
vote
1
reply
430
views
Answer: Answer: Unaligned rRNA in RNAseq in balb/cj mouse
11 weeks ago by dsull ★ 6.9k
0
votes
0
replies
482
views
Comment: Comment: Script for Rstudio
11 weeks ago by dsull ★ 6.9k
1
vote
1
reply
566
views
Comment: Comment: Segmentation fault (core dumped)
11 weeks ago by dsull ★ 6.9k
1
vote
1
reply
566
views
Comment: Comment: Segmentation fault (core dumped)
11 weeks ago by dsull ★ 6.9k
3
votes
1
reply
954
views
Answer: Answer: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
11 weeks ago by dsull ★ 6.9k
1
vote
1
reply
954
views
Comment: Comment: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
11 weeks ago by dsull ★ 6.9k
1
vote
0
replies
484
views
Comment: Comment: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
3 months ago by dsull ★ 6.9k
1
vote
1
reply
484
views
Answer: Answer: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
3 months ago by dsull ★ 6.9k
1
vote
0
replies
511
views
Comment: Comment: Genotype File
3 months ago by dsull ★ 6.9k
1
vote
1
reply
498
views
Comment: Comment: DNA SPRITE Expirment Benchmark
3 months ago by dsull ★ 6.9k
2
votes
1
reply
498
views
Answer: Answer: DNA SPRITE Expirment Benchmark
3 months ago by dsull ★ 6.9k
2
votes
1
reply
600
views
Comment: Comment: Non-existent transcript as a result from Salmon
3 months ago by dsull ★ 6.9k
0
votes
1
reply
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
0
votes
2
replies
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
0
votes
1
reply
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
1
vote
1
reply
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
2
votes
1
reply
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
1
vote
1
reply
758
views
Comment: Comment: Low mapping rate using SALMON
3 months ago by dsull ★ 6.9k
0
votes
0
replies
246
views
Comment: Comment: How can you separate and ignore the expression changes caused by single cell iso
3 months ago by dsull ★ 6.9k
1
vote
1
reply
758
views
Comment: Comment: Low mapping rate using SALMON
3 months ago by dsull ★ 6.9k
0
votes
0
replies
580
views
Comment: Comment: Best workflow for identification of isoforms and splice variants
3 months ago by dsull ★ 6.9k
2
votes
2
replies
580
views
Comment: Comment: Best workflow for identification of isoforms and splice variants
3 months ago by dsull ★ 6.9k
1
vote
0
replies
1.0k
views
Comment: Comment: What bioinformatics codes would you use for performance benchmarking on a new sy
3 months ago by dsull ★ 6.9k
0
votes
0
replies
313
views
Answer: Answer: unmapped reads Kallisto bulk RNA-seq
3 months ago by dsull ★ 6.9k
0
votes
2
replies
744
views
Comment: Comment: Why do I have * in my FASTA?
3 months ago by dsull ★ 6.9k
0
votes
0
replies
612
views
Comment: Comment: I encountered a problem while using Mageck to analysis CRISPR screen data
3 months ago by dsull ★ 6.9k
2
votes
1
reply
591
views
Comment: Comment: RNA seq mapping
3 months ago by dsull ★ 6.9k
2
votes
0
replies
305
views
Answer: Answer: extracting cell specific reads from cellranger BAM output file
3 months ago by dsull ★ 6.9k
720 results • Page 1 of 15
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6