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425
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Comment: Comment: DE analysis from kallisto estimated counts (only)
7 hours ago by dsull ★ 6.9k
0
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1
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425
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Comment: Comment: DE analysis from kallisto estimated counts (only)
1 day ago by dsull ★ 6.9k
0
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1
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425
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Comment: Comment: DE analysis from kallisto estimated counts (only)
2 days ago by dsull ★ 6.9k
0
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0
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340
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Comment: Comment: How to perform corrected Cell Barcode/UMI calling with an externally sorted BAM?
12 days ago by dsull ★ 6.9k
1
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0
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565
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Comment: Comment: Pre-pseudoalignment preprocessing
14 days ago by dsull ★ 6.9k
1
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1
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460
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Comment: Comment: alignment to human transcriptome with Bowtie2
4 weeks ago by dsull ★ 6.9k
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685
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Comment: Comment: How the field has changed in the last 5 years, and 25 years (up to 2024)
4 weeks ago by dsull ★ 6.9k
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0
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626
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Comment: Comment: How to handle RNA seq data with unbalanced % rRNA by group?
5 weeks ago by dsull ★ 6.9k
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1
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1.1k
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Comment: Comment: How to determine whether it is 10x data
5 weeks ago by dsull ★ 6.9k
3
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2
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626
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Answer: Answer: How to handle RNA seq data with unbalanced % rRNA by group?
6 weeks ago by dsull ★ 6.9k
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545
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Comment: Comment: How to count the number and proportion of different barcode combinations in DNA
updated 7 weeks ago by 44k • written 7 weeks ago by ★ 6.9k
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331
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Comment: Comment: Help With Sleuth
8 weeks ago by dsull ★ 6.9k
0
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631
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Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
8 weeks ago by dsull ★ 6.9k
2
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0
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368
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Answer: Answer: How far pangenome from being the mainstream?
8 weeks ago by dsull ★ 6.9k
0
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1
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631
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Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
8 weeks ago by dsull ★ 6.9k
0
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1
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631
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Comment: Comment: ncRNA, pseudogenes and lncRNA genes in highly variable features ( scRNA)
8 weeks ago by dsull ★ 6.9k
1
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1
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523
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Comment: Comment: Problem while using Tophat 2.1.0 to search gene fusions
9 weeks ago by dsull ★ 6.9k
1
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1
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704
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Answer: Answer: Salmon quantification not as expected; "versionInfo.json doesn't seem to exist"
9 weeks ago by dsull ★ 6.9k
0
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0
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591
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Comment: Comment: What should I do if death cell counts and types biologically important in my sin
10 weeks ago by dsull ★ 6.9k
0
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0
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633
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Comment: Comment: Chromium 5’ Next GEM single cell STARsolo
10 weeks ago by dsull ★ 6.9k
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0
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1.0k
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
10 weeks ago by dsull ★ 6.9k
0
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0
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633
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Comment: Comment: Chromium 5’ Next GEM single cell STARsolo
10 weeks ago by dsull ★ 6.9k
0
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1
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633
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Answer: Answer: Chromium 5’ Next GEM single cell STARsolo
10 weeks ago by dsull ★ 6.9k
0
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1
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1.0k
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Comment: Comment: Kallisto: to scaledTPM or not to scaledTPM
10 weeks ago by dsull ★ 6.9k
1
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0
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437
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Comment: Comment: Unaligned rRNA in RNAseq in balb/cj mouse
11 weeks ago by dsull ★ 6.9k
1
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1
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437
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Answer: Answer: Unaligned rRNA in RNAseq in balb/cj mouse
11 weeks ago by dsull ★ 6.9k
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0
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489
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Comment: Comment: Script for Rstudio
11 weeks ago by dsull ★ 6.9k
1
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1
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574
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Comment: Comment: Segmentation fault (core dumped)
12 weeks ago by dsull ★ 6.9k
1
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1
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574
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Comment: Comment: Segmentation fault (core dumped)
12 weeks ago by dsull ★ 6.9k
3
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1
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959
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Answer: Answer: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
12 weeks ago by dsull ★ 6.9k
1
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1
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959
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Comment: Comment: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
12 weeks ago by dsull ★ 6.9k
1
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0
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491
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Comment: Comment: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
3 months ago by dsull ★ 6.9k
1
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1
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491
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Answer: Answer: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
3 months ago by dsull ★ 6.9k
1
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0
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513
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Comment: Comment: Genotype File
3 months ago by dsull ★ 6.9k
1
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1
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505
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Comment: Comment: DNA SPRITE Expirment Benchmark
3 months ago by dsull ★ 6.9k
2
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1
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505
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Answer: Answer: DNA SPRITE Expirment Benchmark
3 months ago by dsull ★ 6.9k
2
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1
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612
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Comment: Comment: Non-existent transcript as a result from Salmon
3 months ago by dsull ★ 6.9k
0
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1
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1.6k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
0
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2
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1.6k
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Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
0
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1
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1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
1
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1
reply
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
2
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1
reply
1.6k
views
Comment: Comment: Is "training", fine tuning, or overfitting on "external independent validation d
3 months ago by dsull ★ 6.9k
1
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1
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777
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Comment: Comment: Low mapping rate using SALMON
3 months ago by dsull ★ 6.9k
0
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0
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248
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Comment: Comment: How can you separate and ignore the expression changes caused by single cell iso
3 months ago by dsull ★ 6.9k
1
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1
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777
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Comment: Comment: Low mapping rate using SALMON
3 months ago by dsull ★ 6.9k
0
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0
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590
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Comment: Comment: Best workflow for identification of isoforms and splice variants
3 months ago by dsull ★ 6.9k
2
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2
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590
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Comment: Comment: Best workflow for identification of isoforms and splice variants
3 months ago by dsull ★ 6.9k
1
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0
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1.0k
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Comment: Comment: What bioinformatics codes would you use for performance benchmarking on a new sy
3 months ago by dsull ★ 6.9k
0
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0
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315
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Answer: Answer: unmapped reads Kallisto bulk RNA-seq
3 months ago by dsull ★ 6.9k
0
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2
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762
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Comment: Comment: Why do I have * in my FASTA?
3 months ago by dsull ★ 6.9k
723 results • Page 1 of 15
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