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4
votes
3
replies
1.3k
views
How to download a genome assembly from the NCBI website?
genome
updated 2.2 years ago by 148k • written 2.2 years ago by ▴ 410
7
votes
10
replies
6.9k
views
Running multiQC on more than one file Log.final.out from STAR
multiqc star
updated 2.5 years ago by • 0 • written 8.2 years ago by ▴ 410
69
votes
17
replies
43k
views
12 follow
Transform a GTF file into a data frame in R
R RNA-Seq GTF
updated 3 months ago by 44k • written 7.3 years ago by ▴ 410
1
vote
4
replies
3.6k
views
How can I get a rdotplot file in lastz?
lastz r rdotplot dotplot genomic alignment
updated 4.5 years ago by 20 • written 7.3 years ago by ▴ 410
4
votes
1
reply
4.1k
views
How can I input a BAM file to the samtools mpileup command without using a text file?
samtools mpileup bam variant calling
updated 4.6 years ago by 20 • written 7.8 years ago by ▴ 410
0
votes
1
reply
12k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
5.6 years ago by biomagician ▴ 410
0
votes
0
replies
27k
views
Comment: C: What is the right illumina universal adapter sequence for trimming paired-end re
5.7 years ago by biomagician ▴ 410
2
votes
1
reply
1.4k
views
pacbio db and las files
db pacbio las next-gen
updated 21 months ago by 44k • written 7.6 years ago by ▴ 410
8
votes
7
replies
7.4k
views
How to rename chromosome names in GTF file?
GTF FASTA annotation genome
updated 6.3 years ago by 20 • written 7.3 years ago by ▴ 410
0
votes
0
replies
2.7k
views
Using the align() function of the Rsubread package; error: unrecognized option `--gtfFeature'
rsubread subread ngs next-gen seq alignment
updated 6.3 years ago by 44k • written 7.7 years ago by ▴ 410
8
votes
8
replies
4.5k
views
bwa mem misaligns my contigs to the reference by a few bases
bwa bwt bwa mem contig alignment
updated 6.5 years ago by 20 • written 7.5 years ago by ▴ 410
4
votes
4
replies
3.0k
views
Is there an R function that transforms a decimal SAM FLAG into a list of strings?
R SAM FLAG alignment format bam
updated 6.6 years ago by ▴ 10 • written 7.3 years ago by ▴ 410
5
votes
16
replies
8.6k
views
Problem with topGO: GO term enrichment analysis
go topgo bioconductor r error
updated 6.9 years ago by ▴ 10 • written 7.4 years ago by ▴ 410
0
votes
0
replies
77k
views
Comment: C: Extract User Defined Region From An Fasta File
7.1 years ago by biomagician ▴ 410
0
votes
0
replies
7.0k
views
Answer: A: how to compare 1st row and 1st column value with rest of the row values in R?
7.2 years ago by biomagician ▴ 410
0
votes
2
replies
3.1k
views
Problem installing quiver
quiver pacbio polishing arrow
updated 7.2 years ago by • 0 • written 7.5 years ago by ▴ 410
0
votes
0
replies
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
1
reply
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
7.4k
views
Comment: C: How to rename chromosome names in GTF file?
7.3 years ago by biomagician ▴ 410
0
votes
1
reply
7.4k
views
Comment: C: How to rename chromosome names in GTF file?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
7.0k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
7.3 years ago by biomagician ▴ 410
0
votes
2
replies
7.4k
views
Comment: C: How to rename chromosome names in GTF file?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
43k
views
Comment: C: Transform a GTF file into a data frame in R
7.3 years ago by biomagician ▴ 410
3
votes
1
reply
43k
views
Answer: A: Transform a GTF file into a data frame in R
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
43k
views
Comment: C: Transform a GTF file into a data frame in R
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
43k
views
Comment: Comment: Transform a GTF file into a data frame in R
updated 3 months ago by 44k • written 7.3 years ago by ▴ 410
3
votes
1
reply
5.8k
views
Import the quality scores from a FASTQ file in Python 3 Biopython
python3 fastq biopython quality fasta
updated 7.3 years ago by 5.9k • written 7.3 years ago by ▴ 410
0
votes
0
replies
2.4k
views
Comment: C: Mauve, meaning of coulours and red bars and green lines
7.3 years ago by biomagician ▴ 410
1
vote
2
replies
2.4k
views
Mauve, meaning of coulours and red bars and green lines
mauve alignment colour genomes
7.3 years ago by biomagician ▴ 410
0
votes
1
reply
3.6k
views
Comment: C: How can I get a rdotplot file in lastz?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
3.6k
views
Comment: C: How can I get a rdotplot file in lastz?
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
1.7k
views
Difference between unlocalized and unplaced fragments
chromosomer scaffolding scaffold contig
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
3.4k
views
Comment: C: Blastn error, database creation problem, BLAST
7.3 years ago by biomagician ▴ 410
5
votes
3
replies
3.4k
views
Blastn error, database creation problem, BLAST
blast blastn database makeblastdb
updated 7.3 years ago by 35k • written 7.3 years ago by ▴ 410
0
votes
0
replies
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.3 years ago by biomagician ▴ 410
0
votes
1
reply
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.3 years ago by biomagician ▴ 410
0
votes
0
replies
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.3 years ago by biomagician ▴ 410
0
votes
1
reply
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.4 years ago by biomagician ▴ 410
0
votes
1
reply
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.4 years ago by biomagician ▴ 410
0
votes
0
replies
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.4 years ago by biomagician ▴ 410
0
votes
2
replies
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.4 years ago by biomagician ▴ 410
0
votes
0
replies
8.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
7.4 years ago by biomagician ▴ 410
0
votes
1
reply
3.5k
views
Comment: C: Tool to analysis GO term enrichment in C. elegans
7.4 years ago by biomagician ▴ 410
0
votes
0
replies
3.5k
views
Comment: C: Tool to analysis GO term enrichment in C. elegans
7.4 years ago by biomagician ▴ 410
0
votes
1
reply
4.7k
views
Comment: C: Problem installing Rgraphviz in R
7.4 years ago by biomagician ▴ 410
0
votes
0
replies
4.7k
views
Comment: C: Problem installing Rgraphviz in R
7.4 years ago by biomagician ▴ 410
170 results • Page 1 of 4
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