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3
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2
replies
2.8k
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Tutorial: Continuing Education (Pipelines): Best blogs, Online Lectures, Workshops, etc..
conferences Workshops
updated 18 months ago by 44k • written 7.6 years ago by ▴ 110
0
votes
1
reply
772
views
Aligning & Comparing References for SNPs / Indels
virus INDEL SNP
updated 17 months ago by 44k • written 4.1 years ago by ▴ 110
0
votes
0
replies
1.6k
views
Comment: C: Base count NOT read count - Downsampling to specific number of bases not reads?
5.1 years ago by jnowacki ▴ 110
0
votes
1
reply
1.6k
views
Comment: C: Base count NOT read count - Downsampling to specific number of bases not reads?
5.1 years ago by jnowacki ▴ 110
1
vote
5
replies
1.6k
views
Base count NOT read count - Downsampling to specific number of bases not reads?
seqtk downsample Reads bases fastq
updated 5.1 years ago by 147k • written 5.1 years ago by ▴ 110
0
votes
2
replies
1.7k
views
GC Bias in Sequence Capture - Analysis & Quantification
Gcbias sequencing sequence capture bed picard
updated 5.6 years ago by 20 • written 5.7 years ago by ▴ 110
0
votes
0
replies
1.7k
views
Comment: C: GC Bias in Sequence Capture - Analysis & Quantification
5.7 years ago by jnowacki ▴ 110
0
votes
1
reply
6.6k
views
Depth of Coverage - Calculated Per Probe / Bed Region
depth bam bed
updated 17 months ago by 44k • written 6.9 years ago by ▴ 110
0
votes
0
replies
2.9k
views
Comment: C: Tool For Counting Adapter Dimer: I need metrics NOT trimming
7.3 years ago by jnowacki ▴ 110
2
votes
3
replies
2.9k
views
Tool For Counting Adapter Dimer: I need metrics NOT trimming
trimming dna adapter dimer adapters primer dimer
updated 7.3 years ago by ★ 2.5k • written 7.3 years ago by ▴ 110
0
votes
1
reply
1.7k
views
Metagenomic Mappers & Benchmark Datasets?
mapping metagenomics
updated 7.4 years ago by ▴ 330 • written 7.4 years ago by ▴ 110
0
votes
1
reply
4.1k
views
Comment: C: MetaSpades can't access memory? Crashes when requesting 45 Gigs on a 128 Gig RH
7.4 years ago by jnowacki ▴ 110
1
vote
3
replies
4.1k
views
MetaSpades can't access memory? Crashes when requesting 45 Gigs on a 128 Gig RHEL6 machine
Spades metagenomics jemalloc malloc metaspades.py
7.4 years ago by jnowacki ▴ 110
0
votes
0
replies
1.1k
views
Top microbial WGS (metagenomic) analysis options? Side by Side comparisons
microbial metagenomic
7.5 years ago by jnowacki ▴ 110
0
votes
1
reply
2.6k
views
Comment: Comment: automating multiple fastq.gz -> SAM
7.5 years ago by jnowacki ▴ 110
1
vote
3
replies
1.7k
views
Managing Projects & FastQ files (Getting Organized)
data management organization LIMS sequencing
updated 7.6 years ago by 164k • written 7.6 years ago by ▴ 110
0
votes
0
replies
4.2k
views
Comment: C: Build / make error with bam-readcount on RHEL 6.6 c++config.h No such file or di
7.6 years ago by jnowacki ▴ 110
0
votes
1
reply
4.2k
views
Comment: C: Build / make error with bam-readcount on RHEL 6.6 c++config.h No such file or di
7.6 years ago by jnowacki ▴ 110
0
votes
1
reply
4.2k
views
Comment: C: Build / make error with bam-readcount on RHEL 6.6 c++config.h No such file or di
7.6 years ago by jnowacki ▴ 110
0
votes
5
replies
4.2k
views
Build / make error with bam-readcount on RHEL 6.6 c++config.h No such file or directory
bam-readcount bam-readout make c++config.h
updated 7.6 years ago by 147k • written 7.6 years ago by ▴ 110
3
votes
4
replies
2.3k
views
Finding CEU / NA12891 data on 1000 genome project
NA12891 CEU 1000 Genomes
updated 7.7 years ago by 24k • written 7.7 years ago by ▴ 110
0
votes
1
reply
2.3k
views
Comment: C: Finding CEU / NA12891 data on 1000 genome project
7.7 years ago by jnowacki ▴ 110
0
votes
1
reply
8.2k
views
Comment: C: VCF Files: Help on 0/1 1/1 0/0 1/1 | vs / (phased & unphased
7.7 years ago by jnowacki ▴ 110
12
votes
9
replies
8.2k
views
VCF Files: Help on 0/1 1/1 0/0 1/1 | vs / (phased & unphased
VCF
7.7 years ago by jnowacki ▴ 110
1
vote
1
reply
8.2k
views
Comment: A: VCF Files: Help on 0/1 1/1 0/0 1/1 | vs / (phased & unphased
7.7 years ago by jnowacki ▴ 110
0
votes
1
reply
6.9k
views
Comment: C: Why the CEU trio's parents NA12891 and NA12892 are not in 1000 Genomes phase 3
7.7 years ago by jnowacki ▴ 110
1
vote
1
reply
2.8k
views
How does Bowtie2 handle chimeric singletons?
bowtie2 chimera chimeric
updated 8.0 years ago by 104k • written 8.0 years ago by ▴ 110
1
vote
3
replies
5.0k
views
Running "make" fails on RHEL6 but not Ubuntu (bits/c++config.h:No such file or directory)
bowtie
updated 8.2 years ago by • 0 • written 8.2 years ago by ▴ 110
0
votes
0
replies
5.0k
views
Answer: A: Bowtie Tutorial (Example command) errors out
8.2 years ago by jnowacki ▴ 110
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