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0
votes
0
replies
1.2k
views
Comment:
Comment: Variant annotation using VEP
3.3 years ago by
nkausthu
▴ 30
0
votes
3
replies
1.2k
views
Variant annotation using VEP
Annotation
Zygosity
VEP
updated 3.1 years ago by
smrutimayipanda
▴ 20 • written 3.3 years ago by
nkausthu
▴ 30
1
vote
4
replies
2.9k
views
Using ExomeDepth for GRCH38 processed samples to call CNVs
Exome
GrCh38
ExomeDepth
CNV
updated 14 months ago by
Joel Wallenius
▴ 210 • written 3.8 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.0k
views
Comment:
C: Exome data processing and variant calling based on GRCH38
4.3 years ago by
nkausthu
▴ 30
2
votes
3
replies
1.0k
views
Exome data processing and variant calling based on GRCH38
GRCH38
ALT-aware alignment
Variant calling
updated 4.3 years ago by
WouterDeCoster
47k • written 4.3 years ago by
nkausthu
▴ 30
0
votes
0
replies
1.3k
views
Comment:
C: Alignment of reads to gene and pseudogene
4.4 years ago by
nkausthu
▴ 30
1
vote
3
replies
1.3k
views
Alignment of reads to gene and pseudogene
alignment
Gene
pseudogene
bwa
mapping quality
4.4 years ago by
nkausthu
▴ 30
0
votes
4
replies
1.3k
views
Generation of incorrect heterozygous calls after left normalization using bcftools
bcftools
left normalization
multiallelic sites
updated 5.2 years ago by
Kevin Blighe
88k • written 5.2 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.3k
views
Comment:
C: Generation of incorrect heterozygous calls after left normalization using bcftoo
5.2 years ago by
nkausthu
▴ 30
0
votes
0
replies
2.6k
views
Comment:
C: Why bcftools + guess-ploidy is not giving the correct results
5.5 years ago by
nkausthu
▴ 30
0
votes
5
replies
2.6k
views
Why bcftools + guess-ploidy is not giving the correct results
bcftools
guess-ploidy
5.5 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.4k
views
SPANR result interpretation
SPANR
Intronic variant
Impact on splicing
updated 5.9 years ago by
Kevin Blighe
88k • written 5.9 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.7k
views
Comment:
C: Identification of break points for a balanced translocation
6.2 years ago by
nkausthu
▴ 30
1
vote
4
replies
1.7k
views
Identification of break points for a balanced translocation
WGS
Breakpoint analysis
Balanced translocation
updated 6.2 years ago by
Pierre Lindenbaum
164k • written 6.2 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.7k
views
How to order biostar handbook professional version
Biostar handbook
updated 6.2 years ago by
jared.andrews07
★ 18k • written 6.2 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.4k
views
Comment:
C: Extraction of partially mapped reads from BAM
6.2 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.4k
views
Comment:
C: Extraction of partially mapped reads from BAM
6.2 years ago by
nkausthu
▴ 30
3
votes
8
replies
3.4k
views
Extraction of partially mapped reads from BAM
BAM
Partially mapped reads
BWA
updated 6.2 years ago by
Pierre Lindenbaum
164k • written 6.2 years ago by
nkausthu
▴ 30
1
vote
1
reply
1.5k
views
Identification of Common ROH region between two exomes
ROH
Filtus
BCFTOOLs
EXOME
updated 6.6 years ago by
Biostar
20 • written 6.6 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.4k
views
Comment:
C: extractPIRs is throwing an ERROR
6.6 years ago by
nkausthu
▴ 30
0
votes
3
replies
1.4k
views
extractPIRs is throwing an ERROR
extractPIRs
SHAPEIT
PHASING
updated 6.6 years ago by
GenoMax
147k • written 6.6 years ago by
nkausthu
▴ 30
0
votes
0
replies
3.5k
views
Comment:
C: Tools for visualization of CNVs called by XHMM
6.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.5k
views
Comment:
C: Tools for visualization of CNVs called by XHMM
6.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.5k
views
Comment:
C: Tools for visualization of CNVs called by XHMM
6.7 years ago by
nkausthu
▴ 30
3
votes
8
replies
3.5k
views
Tools for visualization of CNVs called by XHMM
CNV
Visualization
XHMM
updated 6.7 years ago by
bernatgel
★ 3.4k • written 6.7 years ago by
nkausthu
▴ 30
0
votes
0
replies
3.5k
views
Answer:
A: Tools for visualization of CNVs called by XHMM
6.7 years ago by
nkausthu
▴ 30
0
votes
0
replies
2.2k
views
Answer:
A: VisCap 'mat.cov' not found error in R
6.7 years ago by
nkausthu
▴ 30
3
votes
6
replies
1.9k
views
literature mining for genes and mutations
Pubmed
Genes
Mutations
mining
6.7 years ago by
nkausthu
▴ 30
0
votes
0
replies
1.9k
views
Answer:
A: literature mining for genes and mutations
6.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
1.9k
views
Comment:
C: literature mining for genes and mutations
6.7 years ago by
nkausthu
▴ 30
0
votes
0
replies
1.6k
views
Comment:
C: High score deletion called by XHMM shows full coverage through IGV
6.9 years ago by
nkausthu
▴ 30
0
votes
3
replies
1.6k
views
High score deletion called by XHMM shows full coverage through IGV
XHMM
CNV
IGV
6.9 years ago by
nkausthu
▴ 30
0
votes
0
replies
1.6k
views
Answer:
A: High score deletion called by XHMM shows full coverage through IGV
6.9 years ago by
nkausthu
▴ 30
0
votes
0
replies
3.9k
views
Comment:
C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.9k
views
Comment:
C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.9k
views
Comment:
C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.9k
views
Comment:
C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.9k
views
Comment:
C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.9k
views
Comment:
C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by
nkausthu
▴ 30
0
votes
13
replies
3.9k
views
Annotation of XHMM VCF file (CNV analysis)
CNV
EXOME
XHMM
ANNOTATION
VCF
7.0 years ago by
nkausthu
▴ 30
2
votes
11
replies
3.4k
views
Allele frequency calculation
Allele frequency
Joint genotype calling
7.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.4k
views
Comment:
C: Allele frequency calculation
7.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.4k
views
Comment:
C: Allele frequency calculation
7.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.4k
views
Comment:
C: Allele frequency calculation
7.7 years ago by
nkausthu
▴ 30
0
votes
1
reply
3.4k
views
Comment:
C: Allele frequency calculation
7.7 years ago by
nkausthu
▴ 30
5
votes
6
replies
4.0k
views
Number of homozygous and heterozygous variants
Genotype
homozygous
heterozygous
VCF
updated 7.8 years ago by
Len Trigg
★ 1.6k • written 7.8 years ago by
nkausthu
▴ 30
0
votes
0
replies
4.0k
views
Comment:
C: Number of homozygous and heterozygous variants
7.8 years ago by
nkausthu
▴ 30
0
votes
1
reply
4.0k
views
Comment:
C: Number of homozygous and heterozygous variants
7.8 years ago by
nkausthu
▴ 30
0
votes
2
replies
2.7k
views
Variant frequency calculation
Variant frequency
homozygous
heterozygous
7.8 years ago by
nkausthu
▴ 30
4
votes
2
replies
1.6k
views
Candidate Gene Prioritization
Seed genes
Prioritization
Clustering
updated 8.1 years ago by
unksci
▴ 180 • written 8.2 years ago by
nkausthu
▴ 30
54 results • Page
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