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Comment: Comment: Variant annotation using VEP
3.3 years ago by nkausthu ▴ 30
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3
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1.2k
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Variant annotation using VEP
Annotation Zygosity VEP
updated 3.1 years ago by ▴ 20 • written 3.3 years ago by ▴ 30
1
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4
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2.9k
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Using ExomeDepth for GRCH38 processed samples to call CNVs
Exome GrCh38 ExomeDepth CNV
updated 14 months ago by ▴ 210 • written 3.8 years ago by ▴ 30
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Comment: C: Exome data processing and variant calling based on GRCH38
4.3 years ago by nkausthu ▴ 30
2
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3
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1.0k
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Exome data processing and variant calling based on GRCH38
GRCH38 ALT-aware alignment Variant calling
updated 4.3 years ago by 47k • written 4.3 years ago by ▴ 30
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1.3k
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Comment: C: Alignment of reads to gene and pseudogene
4.4 years ago by nkausthu ▴ 30
1
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3
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1.3k
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Alignment of reads to gene and pseudogene
alignment Gene pseudogene bwa mapping quality
4.4 years ago by nkausthu ▴ 30
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4
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1.3k
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Generation of incorrect heterozygous calls after left normalization using bcftools
bcftools left normalization multiallelic sites
updated 5.2 years ago by 88k • written 5.2 years ago by ▴ 30
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1
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1.3k
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Comment: C: Generation of incorrect heterozygous calls after left normalization using bcftoo
5.2 years ago by nkausthu ▴ 30
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2.6k
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Comment: C: Why bcftools + guess-ploidy is not giving the correct results
5.5 years ago by nkausthu ▴ 30
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5
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2.6k
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Why bcftools + guess-ploidy is not giving the correct results
bcftools guess-ploidy
5.5 years ago by nkausthu ▴ 30
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1
reply
1.4k
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SPANR result interpretation
SPANR Intronic variant Impact on splicing
updated 5.9 years ago by 88k • written 5.9 years ago by ▴ 30
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1
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1.7k
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Comment: C: Identification of break points for a balanced translocation
6.2 years ago by nkausthu ▴ 30
1
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4
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1.7k
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Identification of break points for a balanced translocation
WGS Breakpoint analysis Balanced translocation
updated 6.2 years ago by 164k • written 6.2 years ago by ▴ 30
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1
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1.7k
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How to order biostar handbook professional version
Biostar handbook
updated 6.2 years ago by ★ 18k • written 6.2 years ago by ▴ 30
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1
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3.4k
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Comment: C: Extraction of partially mapped reads from BAM
6.2 years ago by nkausthu ▴ 30
0
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1
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3.4k
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Comment: C: Extraction of partially mapped reads from BAM
6.2 years ago by nkausthu ▴ 30
3
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8
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3.4k
views
Extraction of partially mapped reads from BAM
BAM Partially mapped reads BWA
updated 6.2 years ago by 164k • written 6.2 years ago by ▴ 30
1
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1
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1.5k
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Identification of Common ROH region between two exomes
ROH Filtus BCFTOOLs EXOME
updated 6.6 years ago by 20 • written 6.6 years ago by ▴ 30
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1.4k
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Comment: C: extractPIRs is throwing an ERROR
6.6 years ago by nkausthu ▴ 30
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3
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1.4k
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extractPIRs is throwing an ERROR
extractPIRs SHAPEIT PHASING
updated 6.6 years ago by 147k • written 6.6 years ago by ▴ 30
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Comment: C: Tools for visualization of CNVs called by XHMM
6.7 years ago by nkausthu ▴ 30
0
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1
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3.5k
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Comment: C: Tools for visualization of CNVs called by XHMM
6.7 years ago by nkausthu ▴ 30
0
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1
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3.5k
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Comment: C: Tools for visualization of CNVs called by XHMM
6.7 years ago by nkausthu ▴ 30
3
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8
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3.5k
views
Tools for visualization of CNVs called by XHMM
CNV Visualization XHMM
updated 6.7 years ago by ★ 3.4k • written 6.7 years ago by ▴ 30
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Answer: A: Tools for visualization of CNVs called by XHMM
6.7 years ago by nkausthu ▴ 30
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0
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2.2k
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Answer: A: VisCap 'mat.cov' not found error in R
6.7 years ago by nkausthu ▴ 30
3
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6
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1.9k
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literature mining for genes and mutations
Pubmed Genes Mutations mining
6.8 years ago by nkausthu ▴ 30
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1.9k
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Answer: A: literature mining for genes and mutations
6.8 years ago by nkausthu ▴ 30
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1
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1.9k
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Comment: C: literature mining for genes and mutations
6.8 years ago by nkausthu ▴ 30
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1.6k
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Comment: C: High score deletion called by XHMM shows full coverage through IGV
7.0 years ago by nkausthu ▴ 30
0
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3
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1.6k
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High score deletion called by XHMM shows full coverage through IGV
XHMM CNV IGV
7.0 years ago by nkausthu ▴ 30
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1.6k
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Answer: A: High score deletion called by XHMM shows full coverage through IGV
7.0 years ago by nkausthu ▴ 30
0
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0
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3.9k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by nkausthu ▴ 30
0
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1
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3.9k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by nkausthu ▴ 30
0
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1
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3.9k
views
Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by nkausthu ▴ 30
0
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1
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3.9k
views
Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by nkausthu ▴ 30
0
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1
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3.9k
views
Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by nkausthu ▴ 30
0
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1
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3.9k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.0 years ago by nkausthu ▴ 30
0
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13
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3.9k
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Annotation of XHMM VCF file (CNV analysis)
CNV EXOME XHMM ANNOTATION VCF
7.0 years ago by nkausthu ▴ 30
2
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11
replies
3.4k
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Allele frequency calculation
Allele frequency Joint genotype calling
7.7 years ago by nkausthu ▴ 30
0
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1
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3.4k
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Comment: C: Allele frequency calculation
7.7 years ago by nkausthu ▴ 30
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1
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3.4k
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Comment: C: Allele frequency calculation
7.7 years ago by nkausthu ▴ 30
0
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1
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3.4k
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Comment: C: Allele frequency calculation
7.7 years ago by nkausthu ▴ 30
0
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1
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3.4k
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Comment: C: Allele frequency calculation
7.7 years ago by nkausthu ▴ 30
5
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6
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4.0k
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Number of homozygous and heterozygous variants
Genotype homozygous heterozygous VCF
updated 7.8 years ago by ★ 1.6k • written 7.8 years ago by ▴ 30
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0
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4.0k
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Comment: C: Number of homozygous and heterozygous variants
7.8 years ago by nkausthu ▴ 30
0
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1
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4.0k
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Comment: C: Number of homozygous and heterozygous variants
7.8 years ago by nkausthu ▴ 30
0
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2
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2.7k
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Variant frequency calculation
Variant frequency homozygous heterozygous
7.8 years ago by nkausthu ▴ 30
4
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2
replies
1.6k
views
Candidate Gene Prioritization
Seed genes Prioritization Clustering
updated 8.1 years ago by ▴ 180 • written 8.2 years ago by ▴ 30
54 results • Page 1 of 2
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