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0
votes
0
replies
608
views
Comment:
Comment: number of homozygotes with phenotype
11 months ago by
ccagg
▴ 60
2
votes
2
replies
608
views
number of homozygotes with phenotype
plink
gwas
11 months ago by
ccagg
▴ 60
0
votes
0
replies
310
views
recessive model in saige
GWAS
11 months ago by
ccagg
▴ 60
1
vote
1
reply
1.4k
views
insert size in bam file do not make sense
samtools
cfDNA
updated 17 months ago by
benformatics
4.1k • written 17 months ago by
ccagg
▴ 60
1
vote
7
replies
3.2k
views
test dataset for MinIon algorithm development
nanopore
sequencing
updated 24 months ago by
GenoMax
148k • written 6.7 years ago by
ccagg
▴ 60
0
votes
0
replies
2.5k
views
Comment:
Comment: BCL2Fastq when I5 index is UMI
3.5 years ago by
ccagg
▴ 60
4
votes
2
replies
2.5k
views
BCL2Fastq when I5 index is UMI
UMI
bcl2fastq
demultiplex
3.5 years ago by
ccagg
▴ 60
2
votes
1
reply
985
views
Percentage of on target reads in custom capture sequencing
coverage
capture
sequencing
bam
updated 3.5 years ago by
Pierre Lindenbaum
164k • written 3.5 years ago by
ccagg
▴ 60
0
votes
1
reply
1.1k
views
Comment:
C: background exome gVCFs for haplotype calling
4.3 years ago by
ccagg
▴ 60
0
votes
3
replies
1.1k
views
background exome gVCFs for haplotype calling
exome
GATK
4.3 years ago by
ccagg
▴ 60
0
votes
1
reply
1.1k
views
Finding shared genotypes between multiple VCF files
vcf
SNP
exome
updated 4.4 years ago by
Pierre Lindenbaum
164k • written 4.4 years ago by
ccagg
▴ 60
9
votes
6
replies
5.0k
views
Combining multiple bedfiles
bed
bedtools
updated 4.6 years ago by
Biostar
20 • written 6.5 years ago by
ccagg
▴ 60
0
votes
0
replies
1.2k
views
differentially methylated bed file from encode
encode
methylation
WGBS
6.5 years ago by
ccagg
▴ 60
0
votes
0
replies
3.2k
views
Comment:
C: test dataset for MinIon algorithm development
6.7 years ago by
ccagg
▴ 60
0
votes
1
reply
3.2k
views
Comment:
C: test dataset for MinIon algorithm development
6.7 years ago by
ccagg
▴ 60
0
votes
2
replies
2.6k
views
low mappability in single cell rna-seq data?
RNA-Seq
contamination
alignment
6.9 years ago by
ccagg
▴ 60
0
votes
1
reply
1.4k
views
more than 28 million methylation sites?
bs-seq
methylation
cpg
bismark
updated 7.0 years ago by
igor
13k • written 7.0 years ago by
ccagg
▴ 60
0
votes
0
replies
1.5k
views
ENCODE methylation pipeline for command line
encode
methylation
WGBS
7.3 years ago by
ccagg
▴ 60
0
votes
0
replies
3.4k
views
Answer:
A: Soft-clipping of reads in Amplicon-sequenced data
7.4 years ago by
ccagg
▴ 60
0
votes
0
replies
1.5k
views
simulating variants with specific frequency using GATK
gatk
vcf
updated 7.5 years ago by
Biostar
20 • written 7.5 years ago by
ccagg
▴ 60
0
votes
1
reply
1.9k
views
need advice on installing ZINBA on new version of R
zinba
updated 7.5 years ago by
Biostar
20 • written 7.7 years ago by
ccagg
▴ 60
1
vote
0
replies
3.7k
views
Answer:
A: Extracting Features That Appear In TSS Regions
7.5 years ago by
ccagg
▴ 60
0
votes
1
reply
3.3k
views
Comment:
C: bam to fasta error using samtools
7.8 years ago by
ccagg
▴ 60
0
votes
1
reply
3.3k
views
Comment:
C: bam to fasta error using samtools
7.8 years ago by
ccagg
▴ 60
1
vote
9
replies
3.3k
views
bam to fasta error using samtools
fasta
bam
updated 21 months ago by
Ram
44k • written 7.8 years ago by
ccagg
▴ 60
5
votes
3
replies
4.6k
views
Peak center for ATAC-seq data
ATAC-seq
ChIP-Seq
peak calling
coverage plots
updated 8.1 years ago by
igor
13k • written 8.1 years ago by
ccagg
▴ 60
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