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how to run limma for large datasets
R HPC biostatistics statistics
updated 5 weeks ago by ★ 7.7k • written 9 months ago by ▴ 470
0
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7
replies
2.2k
views
space converted into dots in header name
R Rstudio microbiome
updated 3.8 years ago by 21k • written 3.8 years ago by ▴ 470
1
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0
replies
217
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how to perform QTL analysis and how to integrate multi-omit datasets
R statistics genetics
4 months ago by Bioinfonext ▴ 470
0
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0
replies
658
views
Comment: Comment: how to run limma for large datasets
9 months ago by Bioinfonext ▴ 470
1
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1
reply
466
views
robust linear regression with interaction term
R epigenetic biostatistics statistics
updated 9 months ago by ▴ 930 • written 9 months ago by ▴ 470
0
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0
replies
685
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Comment: Comment: how to do Manhatton plot for significant DNA methylation sites associations
10 months ago by Bioinfonext ▴ 470
1
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2
replies
685
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how to do Manhatton plot for significant DNA methylation sites associations
R array EPIC statistics Epigenetics
10 months ago by Bioinfonext ▴ 470
1
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3
replies
1.9k
views
GOSeq gene ontology enrichment analysis in rice
goseq R
updated 11 months ago by 20k • written 4.6 years ago by ▴ 470
1
vote
1
reply
387
views
how arrange samples columns according to row names from another file in R
statistics r biostatistics
updated 11 months ago by 13k • written 11 months ago by ▴ 470
3
votes
2
replies
547
views
how to merge two files without duplicating same column
R statistics biostatistics
updated 11 months ago by ▴ 450 • written 11 months ago by ▴ 470
1
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1
reply
718
views
Comment: Comment: how to remove multiple columns from a file in R
12 months ago by Bioinfonext ▴ 470
3
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4
replies
718
views
how to remove multiple columns from a file in R
r
12 months ago by Bioinfonext ▴ 470
0
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2
replies
630
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Comment: Comment: select unique samples in R
12 months ago by Bioinfonext ▴ 470
1
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4
replies
630
views
select unique samples in R
statistics r biostatistics
12 months ago by Bioinfonext ▴ 470
0
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0
replies
495
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Comment: Comment: filtering samples
13 months ago by Bioinfonext ▴ 470
0
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2
replies
495
views
filtering samples
R statistics
updated 13 months ago by 148k • written 13 months ago by ▴ 470
2
votes
6
replies
850
views
how to merge multiple files based on column header
R statistics biostatistics
updated 13 months ago by 6.2k • written 13 months ago by ▴ 470
0
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1
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850
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Comment: Comment: how to merge multiple files based on column header
13 months ago by Bioinfonext ▴ 470
0
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0
replies
640
views
Comment: Comment: R packages for DNA methylation as mediator analysis
13 months ago by Bioinfonext ▴ 470
0
votes
2
replies
640
views
R packages for DNA methylation as mediator analysis
statistics R EPIgenetics array EPIC
13 months ago by Bioinfonext ▴ 470
0
votes
0
replies
356
views
DMRcate design
R Epigenetics EPIC DMRcate
updated 14 months ago by 44k • written 14 months ago by ▴ 470
0
votes
8
replies
5.9k
views
Error: protect(): protection stack overflow
R random-forest
updated 4 months ago by • 0 • written 4.2 years ago by ▴ 470
1
vote
1
reply
500
views
linking methylation/SNPs to gene expression
statistics GWAS R epigenetics
updated 22 months ago by ★ 3.0k • written 22 months ago by ▴ 470
2
votes
2
replies
7.3k
views
How to understand Hisat2 aligment result
RNA-Seq
updated 2.2 years ago by ▴ 40 • written 7.9 years ago by ▴ 470
0
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0
replies
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
0
votes
0
replies
366
views
Imputation during SNPs calling
Genomics statistics Bioconducter
2.6 years ago by Bioinfonext ▴ 470
0
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1
reply
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
0
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1
reply
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
0
votes
0
replies
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
0
votes
0
replies
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
0
votes
1
reply
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
0
votes
1
reply
2.1k
views
Comment: Comment: arrange samples in same order in rows and column in R
2.6 years ago by Bioinfonext ▴ 470
4
votes
14
replies
2.1k
views
arrange samples in same order in rows and column in R
R statistics
2.6 years ago by Bioinfonext ▴ 470
0
votes
0
replies
396
views
filtering.context.removal in RnBeads
RnBeads Epigenetics R
2.7 years ago by Bioinfonext ▴ 470
3
votes
8
replies
7.3k
views
how to run Jupyter script on Slurm HPC
HPC jupyter
updated 2.8 years ago by ▴ 10 • written 4.4 years ago by ▴ 470
0
votes
1
reply
868
views
how to plot correlation data in R
Network cytoscape R
updated 3.2 years ago by 88k • written 3.2 years ago by ▴ 470
4
votes
1
reply
3.7k
views
how to pheatmap color bar based on column category
Bioconducter R pheatmap
3.2 years ago by Bioinfonext ▴ 470
0
votes
1
reply
1.6k
views
Network plot using NetCoMi and igraph
igraph R plot Network amplicon
updated 3.3 years ago by 3.8k • written 3.3 years ago by ▴ 470
0
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0
replies
1.1k
views
Comment: Comment: network analysis for microbial amplicon sequencing data
3.3 years ago by Bioinfonext ▴ 470
2
votes
2
replies
1.1k
views
network analysis for microbial amplicon sequencing data
plot Network igraph R
3.3 years ago by Bioinfonext ▴ 470
0
votes
1
reply
3.8k
views
Comment: Comment: BUSCO installation and run
3.4 years ago by Bioinfonext ▴ 470
3
votes
5
replies
3.8k
views
BUSCO installation and run
RNAseq
updated 3.4 years ago by 8.8k • written 3.4 years ago by ▴ 470
1
vote
0
replies
3.8k
views
Comment: Comment: BUSCO installation and run
3.4 years ago by Bioinfonext ▴ 470
6
votes
18
replies
5.8k
views
6 follow
How to generate a combined read count txt file with header as file name
bash linux awk R
updated 3.3 years ago by ▴ 10 • written 5.3 years ago by ▴ 470
0
votes
1
reply
2.8k
views
how to color positive and negative correlation in Cytoscape
Cytoscape
updated 3.5 years ago by • 0 • written 3.5 years ago by ▴ 470
1
vote
2
replies
1.0k
views
Cytoscape for co-occurence network analysis
Microbiome 16S analysis Cytoscape Network
3.5 years ago by Bioinfonext ▴ 470
0
votes
0
replies
2.1k
views
Comment: Comment: pheatmap input file
3.6 years ago by Bioinfonext ▴ 470
0
votes
1
reply
2.1k
views
Comment: Comment: pheatmap input file
3.6 years ago by Bioinfonext ▴ 470
0
votes
1
reply
2.1k
views
Comment: Comment: pheatmap input file
3.6 years ago by Bioinfonext ▴ 470
1
vote
6
replies
2.1k
views
pheatmap input file
r Qiime2 pheatmap
3.6 years ago by Bioinfonext ▴ 470
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