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Comment: Comment: From TPM to raw counts
14 months ago by Gama313 ▴ 130
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0
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2.5k
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Comment: Comment: From TPM to raw counts
16 months ago by Gama313 ▴ 130
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1
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2.5k
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Comment: Comment: From TPM to raw counts
updated 16 months ago by 102k • written 16 months ago by ▴ 130
0
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0
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2.5k
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Comment: Comment: From TPM to raw counts
16 months ago by Gama313 ▴ 130
5
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7
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2.5k
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From TPM to raw counts
tpm Deconvolution rnaseq
14 months ago by Gama313 ▴ 130
1
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0
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1.7k
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Answer: Answer: Cibersort phenotpe file to create signature matrix
22 months ago by Gama313 ▴ 130
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0
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1.3k
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Comment: Comment: RNASeq differential expression masked by pathways disregulation
2.1 years ago by Gama313 ▴ 130
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1
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1.3k
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Comment: Comment: RNASeq differential expression masked by pathways disregulation
2.2 years ago by Gama313 ▴ 130
0
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5
replies
1.3k
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RNASeq differential expression masked by pathways disregulation
normalization batch RNA-seq
updated 8 months ago by 45k • written 2.2 years ago by ▴ 130
18
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2
replies
3.2k
views
Hugely different results between edgeR and DESeq2
edgeR RNASeq Expression Differential DESeq2
updated 2.2 years ago by ★ 7.8k • written 2.2 years ago by ▴ 130
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0
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1.2k
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Comment: Comment: Evaluating RNASeq counts distribution
2.4 years ago by Gama313 ▴ 130
0
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1
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1.2k
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Comment: Comment: Evaluating RNASeq counts distribution
2.4 years ago by Gama313 ▴ 130
3
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6
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1.2k
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Evaluating RNASeq counts distribution
negative differential RNASeq expression binomial
2.4 years ago by Gama313 ▴ 130
0
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0
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1.2k
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Comment: Comment: Evaluating RNASeq counts distribution
2.4 years ago by Gama313 ▴ 130
0
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1
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1.6k
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Comment: Comment: Mutation filtering based on Lanes
2.4 years ago by Gama313 ▴ 130
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0
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1.6k
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Comment: Comment: Mutation filtering based on Lanes
2.4 years ago by Gama313 ▴ 130
0
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1
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1.6k
views
Comment: Comment: Mutation filtering based on Lanes
2.4 years ago by Gama313 ▴ 130
0
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0
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1.6k
views
Comment: Comment: Mutation filtering based on Lanes
2.4 years ago by Gama313 ▴ 130
3
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9
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1.6k
views
Mutation filtering based on Lanes
ngs calling Variant lanes
updated 2.4 years ago by 4.9k • written 2.4 years ago by ▴ 130
3
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0
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552
views
RNASeq counts normalization for RNA degradation
gtf TIN RIN integrity RNASeq
2.6 years ago by Gama313 ▴ 130
0
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1
reply
939
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Comment: Comment: PCR duplicates in FFPE RNASeq
2.7 years ago by Gama313 ▴ 130
0
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3
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939
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PCR duplicates in FFPE RNASeq
PCR-duplicates RNA-Seq FFPE Variant-Calling
updated 12 months ago by 45k • written 2.7 years ago by ▴ 130
0
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0
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1.9k
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Answer: Answer: Calling variants on reads with MAPQ=0 on HaplotypeCaller or bcftools mpileup
2.8 years ago by Gama313 ▴ 130
0
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0
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521
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Coverage drops in fastq alignment against custom Immunoglobulin reference
Alignment RNASeq Immunoglobulin
3.6 years ago by Gama313 ▴ 130
0
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0
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763
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Calculation of the genotype likelyhood from raw data
samtools genotype-likelihood bam
updated 20 months ago by 45k • written 4.5 years ago by ▴ 130
0
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0
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704
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Calculation of the genotype likelyhood
samtools gatk genotype likelihood
4.5 years ago by Gama313 ▴ 130
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0
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1.4k
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Comment: C: pysam doesn't calculate correct nucleotide quantities from .bam file
4.5 years ago by Gama313 ▴ 130
1
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2
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1.4k
views
pysam doesn't calculate correct nucleotide quantities from .bam file
pysam count python
updated 4.5 years ago by 15k • written 4.5 years ago by ▴ 130
0
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1
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2.2k
views
Comment: C: Samtools mplileup detects wrong INDEL positions
5.7 years ago by Gama313 ▴ 130
0
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0
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2.2k
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Comment: C: Samtools mplileup detects wrong INDEL positions
updated 5.7 years ago by 16k • written 5.7 years ago by ▴ 130
0
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1
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2.2k
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Comment: C: Samtools mplileup detects wrong INDEL positions
5.7 years ago by Gama313 ▴ 130
0
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1
reply
2.2k
views
Comment: C: Samtools mplileup detects wrong INDEL positions
updated 5.7 years ago by 16k • written 5.7 years ago by ▴ 130
4
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9
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2.2k
views
Samtools mplileup detects wrong INDEL positions
samtools mpileup variant calling count nuceotides
updated 5.7 years ago by 16k • written 5.7 years ago by ▴ 130
4
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0
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1.2k
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Answer: A: How separate one column in two columns?
updated 5.7 years ago by 87k • written 5.7 years ago by ▴ 130
0
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2
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1.9k
views
HTSeq count versus summarizeOverlaps, mismathc of exon counts
RNA-Seq
updated 8.3 years ago by 12k • written 8.3 years ago by ▴ 130
35 results • Page 1 of 1
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