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2
votes
4
replies
2.8k
views
Installing Bedtools with Cygwin fails.
cygwin bedtools
updated 3.5 years ago by ★ 18k • written 6.1 years ago by ▴ 110
40
votes
6
replies
9.6k
views
Inferring genotype based on RNA sequences (RNA-seq variant calling)
RNA-Seq SNP
updated 3.5 years ago by 44k • written 6.4 years ago by ▴ 110
3
votes
9
replies
2.8k
views
LAST/Poretools - where to start?
sequencing alignment next-gen
updated 4.7 years ago by 20 • written 7.9 years ago by ▴ 110
0
votes
0
replies
2.8k
views
Comment: C: Installing Bedtools with Cygwin fails.
6.1 years ago by omer.k ▴ 110
0
votes
0
replies
11k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.1 years ago by omer.k ▴ 110
0
votes
1
reply
11k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.1 years ago by omer.k ▴ 110
0
votes
1
reply
11k
views
Comment: Comment: Extracting specific sequences from FASTQ using Seqtk
updated 2.7 years ago by 44k • written 6.1 years ago by ▴ 110
2
votes
15
replies
11k
views
Extracting specific sequences from FASTQ using Seqtk
SeqKit
updated 2.7 years ago by 44k • written 6.1 years ago by ▴ 110
0
votes
0
replies
11k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.1 years ago by omer.k ▴ 110
0
votes
2
replies
11k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.1 years ago by omer.k ▴ 110
0
votes
1
reply
11k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.1 years ago by omer.k ▴ 110
0
votes
1
reply
2.3k
views
Comment: C: Variant calling: Samtools QUAL from NGS data Vs. Sanger quality score
6.2 years ago by omer.k ▴ 110
2
votes
3
replies
2.3k
views
Variant calling: Samtools QUAL from NGS data Vs. Sanger quality score
Sanger NGS
6.2 years ago by omer.k ▴ 110
2
votes
0
replies
1.4k
views
IGV: how is "Quality weight allele fraction" calculated?
IGV SNV Varint calling
6.6 years ago by omer.k ▴ 110
0
votes
0
replies
1.1k
views
miRNA Target Prediction (online/offline tools)?
RNA miRNA
6.6 years ago by omer.k ▴ 110
0
votes
0
replies
2.8k
views
Comment: C: LAST/Poretools - where to start?
6.8 years ago by omer.k ▴ 110
0
votes
0
replies
1.8k
views
Comment: C: Search for possible miRNAs based on acquired transcript sequence
6.9 years ago by omer.k ▴ 110
0
votes
1
reply
1.8k
views
Comment: C: Search for possible miRNAs based on acquired transcript sequence
6.9 years ago by omer.k ▴ 110
0
votes
2
replies
1.8k
views
Comment: C: Search for possible miRNAs based on acquired transcript sequence
6.9 years ago by omer.k ▴ 110
0
votes
7
replies
1.8k
views
Search for possible miRNAs based on acquired transcript sequence
miRNA sequence RNA NGS
updated 6.9 years ago by ▴ 520 • written 6.9 years ago by ▴ 110
0
votes
5
replies
2.5k
views
Integrated genome browser, how to add exons?
Software IGV
7.0 years ago by omer.k ▴ 110
0
votes
3
replies
2.5k
views
Comment: A: Integrated genome browser, how to add exons?
7.0 years ago by omer.k ▴ 110
0
votes
1
reply
3.8k
views
Comment: C: Split fasta/fastq into individual fasta files (ubuntu)
7.2 years ago by omer.k ▴ 110
0
votes
5
replies
3.8k
views
Split fasta/fastq into individual fasta files (ubuntu)
NGS script linux MinION
updated 7.2 years ago by 164k • written 7.2 years ago by ▴ 110
1
vote
9
replies
1.7k
views
Screen reads based on certain sequences. Write code myself or designated tools.
sequencing sequence next-gen
updated 7.6 years ago by 20 • written 7.9 years ago by ▴ 110
0
votes
1
reply
2.5k
views
Comment: C: Co-expression network using a dataset from GEO
7.7 years ago by omer.k ▴ 110
4
votes
3
replies
2.5k
views
Co-expression network using a dataset from GEO
RNA-Seq Gene Cytoscape
updated 7.7 years ago by 11k • written 7.8 years ago by ▴ 110
0
votes
2
replies
1.7k
views
Answer: A: Screen reads based on certain sequences. Write code myself or designated tools.
7.9 years ago by omer.k ▴ 110
0
votes
1
reply
1.7k
views
Answer: A: Screen reads based on certain sequences. Write code myself or designated tools.
7.9 years ago by omer.k ▴ 110
0
votes
0
replies
2.8k
views
Comment: C: LAST/Poretools - where to start?
7.9 years ago by omer.k ▴ 110
0
votes
0
replies
2.8k
views
Comment: C: LAST/Poretools - where to start?
7.9 years ago by omer.k ▴ 110
0
votes
1
reply
2.8k
views
Comment: C: LAST/Poretools - where to start?
7.9 years ago by omer.k ▴ 110
0
votes
1
reply
2.8k
views
Comment: C: LAST/Poretools - where to start?
7.9 years ago by omer.k ▴ 110
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