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2
votes
4
replies
3.3k
views
Installing Bedtools with Cygwin fails.
cygwin bedtools
updated 4.1 years ago by ★ 19k • written 6.7 years ago by ▴ 110
40
votes
6
replies
10k
views
Inferring genotype based on RNA sequences (RNA-seq variant calling)
RNA-Seq SNP
updated 4.1 years ago by 45k • written 7.0 years ago by ▴ 110
3
votes
9
replies
3.2k
views
LAST/Poretools - where to start?
sequencing alignment next-gen
updated 5.2 years ago by 20 • written 8.5 years ago by ▴ 110
0
votes
0
replies
3.3k
views
Comment: C: Installing Bedtools with Cygwin fails.
6.7 years ago by omer.k ▴ 110
0
votes
0
replies
13k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.7 years ago by omer.k ▴ 110
0
votes
1
reply
13k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.7 years ago by omer.k ▴ 110
0
votes
1
reply
13k
views
Comment: Comment: Extracting specific sequences from FASTQ using Seqtk
updated 3.3 years ago by 45k • written 6.7 years ago by ▴ 110
2
votes
15
replies
13k
views
Extracting specific sequences from FASTQ using Seqtk
SeqKit
updated 3.3 years ago by 45k • written 6.7 years ago by ▴ 110
0
votes
0
replies
13k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.7 years ago by omer.k ▴ 110
0
votes
2
replies
13k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.7 years ago by omer.k ▴ 110
0
votes
1
reply
13k
views
Comment: C: Extracting specific sequences from FASTQ using Seqtk
6.7 years ago by omer.k ▴ 110
0
votes
1
reply
2.6k
views
Comment: C: Variant calling: Samtools QUAL from NGS data Vs. Sanger quality score
6.8 years ago by omer.k ▴ 110
2
votes
3
replies
2.6k
views
Variant calling: Samtools QUAL from NGS data Vs. Sanger quality score
Sanger NGS
6.8 years ago by omer.k ▴ 110
2
votes
0
replies
1.5k
views
IGV: how is "Quality weight allele fraction" calculated?
IGV SNV Varint calling
7.1 years ago by omer.k ▴ 110
0
votes
0
replies
1.2k
views
miRNA Target Prediction (online/offline tools)?
RNA miRNA
7.1 years ago by omer.k ▴ 110
0
votes
0
replies
3.2k
views
Comment: C: LAST/Poretools - where to start?
7.3 years ago by omer.k ▴ 110
0
votes
0
replies
2.2k
views
Comment: C: Search for possible miRNAs based on acquired transcript sequence
7.4 years ago by omer.k ▴ 110
0
votes
1
reply
2.2k
views
Comment: C: Search for possible miRNAs based on acquired transcript sequence
7.4 years ago by omer.k ▴ 110
0
votes
2
replies
2.2k
views
Comment: C: Search for possible miRNAs based on acquired transcript sequence
7.4 years ago by omer.k ▴ 110
0
votes
7
replies
2.2k
views
Search for possible miRNAs based on acquired transcript sequence
miRNA sequence RNA NGS
updated 7.4 years ago by ▴ 520 • written 7.4 years ago by ▴ 110
0
votes
5
replies
2.8k
views
Integrated genome browser, how to add exons?
Software IGV
7.5 years ago by omer.k ▴ 110
0
votes
3
replies
2.8k
views
Comment: A: Integrated genome browser, how to add exons?
7.5 years ago by omer.k ▴ 110
0
votes
1
reply
4.2k
views
Comment: C: Split fasta/fastq into individual fasta files (ubuntu)
7.7 years ago by omer.k ▴ 110
0
votes
5
replies
4.2k
views
Split fasta/fastq into individual fasta files (ubuntu)
NGS script linux MinION
updated 7.7 years ago by 166k • written 7.7 years ago by ▴ 110
1
vote
9
replies
2.0k
views
Screen reads based on certain sequences. Write code myself or designated tools.
sequencing sequence next-gen
updated 8.2 years ago by 20 • written 8.4 years ago by ▴ 110
0
votes
1
reply
2.9k
views
Comment: C: Co-expression network using a dataset from GEO
8.3 years ago by omer.k ▴ 110
4
votes
3
replies
2.9k
views
Co-expression network using a dataset from GEO
RNA-Seq Gene Cytoscape
updated 8.3 years ago by 11k • written 8.3 years ago by ▴ 110
0
votes
2
replies
2.0k
views
Answer: A: Screen reads based on certain sequences. Write code myself or designated tools.
8.4 years ago by omer.k ▴ 110
0
votes
1
reply
2.0k
views
Answer: A: Screen reads based on certain sequences. Write code myself or designated tools.
8.4 years ago by omer.k ▴ 110
0
votes
0
replies
3.2k
views
Comment: C: LAST/Poretools - where to start?
8.5 years ago by omer.k ▴ 110
0
votes
0
replies
3.2k
views
Comment: C: LAST/Poretools - where to start?
8.5 years ago by omer.k ▴ 110
0
votes
1
reply
3.2k
views
Comment: C: LAST/Poretools - where to start?
8.5 years ago by omer.k ▴ 110
0
votes
1
reply
3.2k
views
Comment: C: LAST/Poretools - where to start?
8.5 years ago by omer.k ▴ 110
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