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4
votes
9
replies
8.6k
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Bioconductor, how to select a subset of samples in an ExpressionSet?
bioconductor expressionset subset
updated 21 months ago by 147k • written 5.9 years ago by ▴ 120
3
votes
5
replies
3.8k
views
Problems with ArrayExpress datasets downloads on Bioconductor
arrayExpress bioconductor
updated 3.7 years ago by ▴ 60 • written 5.7 years ago by ▴ 120
15
votes
4
replies
9.5k
views
Affymetrix Gene Id Format - What Does "At" Stand For?
affymetrix gene identifiers
updated 5.1 years ago by 20 • written 12.9 years ago by ▴ 120
0
votes
0
replies
1.1k
views
Answer: A: How to retrieve the genes associated to an RNA PAXgene gene expression dataset f
5.1 years ago by Davide Chicco ▴ 120
0
votes
3
replies
1.1k
views
How to retrieve the genes associated to an RNA PAXgene gene expression dataset from GEO?
RNA-Seq RNA geo R-language
5.1 years ago by Davide Chicco ▴ 120
0
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0
replies
1.1k
views
Comment: C: How to retrieve the genes associated to an RNA PAXgene gene expression dataset f
5.1 years ago by Davide Chicco ▴ 120
0
votes
0
replies
1.2k
views
Comment: C: Differential gene expression analysis of real-valued expression data of genes an
5.5 years ago by Davide Chicco ▴ 120
0
votes
0
replies
4.2k
views
Comment: C: Differential expression using microarray data and limma, where am I going wrong?
5.5 years ago by Davide Chicco ▴ 120
1
vote
3
replies
1.2k
views
Differential gene expression analysis of real-valued expression data of genes and individuals
gen-expression gene-expression RNA-Seq RNA
updated 5.5 years ago by 35k • written 5.5 years ago by ▴ 120
0
votes
2
replies
971
views
How to validate the association between a ranked list of genes found computationally and a disease?
gene diseases validation
5.5 years ago by Davide Chicco ▴ 120
0
votes
0
replies
2.5k
views
Comment: C: bcftools / samtools, which database does the MAF function use?
5.7 years ago by Davide Chicco ▴ 120
0
votes
2
replies
2.5k
views
bcftools / samtools, which database does the MAF function use?
bcftools samtools MAF
updated 5.7 years ago by 164k • written 5.7 years ago by ▴ 120
0
votes
1
reply
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.7 years ago by Davide Chicco ▴ 120
0
votes
1
reply
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.7 years ago by Davide Chicco ▴ 120
3
votes
2
replies
2.1k
views
bash, how can I distinguish synonymous from non-synonymous variants in VCF files?
R vcf variant
updated 5.7 years ago by 4.1k • written 5.7 years ago by ▴ 120
0
votes
1
reply
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.7 years ago by Davide Chicco ▴ 120
0
votes
1
reply
2.0k
views
Bioconductor, how to convert an ExpressionFeatureSet to an ExpressionSet?
bioconductor
5.7 years ago by Davide Chicco ▴ 120
1
vote
2
replies
955
views
Datasets of genomic regions related to heart failure?
dataset heart
5.7 years ago by Davide Chicco ▴ 120
0
votes
3
replies
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.8 years ago by Davide Chicco ▴ 120
0
votes
1
reply
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.8 years ago by Davide Chicco ▴ 120
0
votes
1
reply
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.8 years ago by Davide Chicco ▴ 120
0
votes
1
reply
8.1k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
5.8 years ago by Davide Chicco ▴ 120
4
votes
17
replies
8.1k
views
How to check the presence of mutations of a specific gene in a specific VCF file?
vcf genes
updated 5.8 years ago by 16k • written 5.8 years ago by ▴ 120
0
votes
0
replies
3.7k
views
Comment: C: Collapsing probesets to genes on WGCNA
5.8 years ago by Davide Chicco ▴ 120
0
votes
3
replies
3.7k
views
Comment: C: Collapsing probesets to genes on WGCNA
5.8 years ago by Davide Chicco ▴ 120
0
votes
1
reply
3.7k
views
Comment: C: Collapsing probesets to genes on WGCNA
5.8 years ago by Davide Chicco ▴ 120
0
votes
1
reply
3.7k
views
Comment: C: Collapsing probesets to genes on WGCNA
5.8 years ago by Davide Chicco ▴ 120
6
votes
11
replies
3.7k
views
Collapsing probesets to genes on WGCNA
WGCNA gene-expression R
updated 7 months ago by 44k • written 5.8 years ago by ▴ 120
13
votes
7
replies
3.5k
views
How to retrieve the genes associated to a VCF file?
vcf genes R
updated 5.8 years ago by ▴ 160 • written 5.8 years ago by ▴ 120
0
votes
1
reply
3.5k
views
Comment: C: R, how to retrieve the genes associated to a VCF file?
5.8 years ago by Davide Chicco ▴ 120
2
votes
2
replies
2.2k
views
How to map Affymetrix probe ID's from a GEO dataset to corresponding gene symbols?
bioconductor r GEO
updated 6.0 years ago by 20 • written 6.1 years ago by ▴ 120
0
votes
1
reply
2.7k
views
Bioconductor getGEO(), how to convert a single eset of GSE matrix files to a list of esets?
Bioconductor getGEO R
6.1 years ago by Davide Chicco ▴ 120
1
vote
2
replies
4.0k
views
Answer: Answer: Why does BedTools Map operation produce all dots as output?
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 120
3
votes
8
replies
4.0k
views
Why does BedTools Map operation produce all dots as output?
genomics map bedtools
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 120
0
votes
1
reply
4.0k
views
Comment: Comment: Why does BedTools Map operation produce all dots as output?
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 120
0
votes
0
replies
4.0k
views
Comment: C: Why does BedTools Map operation produce all dots as output?
10.0 years ago by Davide Chicco ▴ 120
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