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4
votes
9
replies
9.3k
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Bioconductor, how to select a subset of samples in an ExpressionSet?
bioconductor expressionset subset
updated 2.3 years ago by 152k • written 6.5 years ago by ▴ 120
3
votes
5
replies
4.4k
views
Problems with ArrayExpress datasets downloads on Bioconductor
arrayExpress bioconductor
updated 4.3 years ago by ▴ 60 • written 6.3 years ago by ▴ 120
15
votes
4
replies
10k
views
Affymetrix Gene Id Format - What Does "At" Stand For?
affymetrix gene identifiers
updated 5.7 years ago by 20 • written 13.4 years ago by ▴ 120
0
votes
3
replies
1.3k
views
How to retrieve the genes associated to an RNA PAXgene gene expression dataset from GEO?
RNA-Seq RNA geo R-language
5.7 years ago by Davide Chicco ▴ 120
0
votes
0
replies
1.3k
views
Answer: A: How to retrieve the genes associated to an RNA PAXgene gene expression dataset f
5.7 years ago by Davide Chicco ▴ 120
0
votes
0
replies
1.3k
views
Comment: C: How to retrieve the genes associated to an RNA PAXgene gene expression dataset f
5.7 years ago by Davide Chicco ▴ 120
0
votes
0
replies
1.3k
views
Comment: C: Differential gene expression analysis of real-valued expression data of genes an
6.0 years ago by Davide Chicco ▴ 120
0
votes
0
replies
4.5k
views
Comment: C: Differential expression using microarray data and limma, where am I going wrong?
6.0 years ago by Davide Chicco ▴ 120
1
vote
3
replies
1.3k
views
Differential gene expression analysis of real-valued expression data of genes and individuals
gen-expression gene-expression RNA-Seq RNA
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 120
0
votes
2
replies
1.1k
views
How to validate the association between a ranked list of genes found computationally and a disease?
gene diseases validation
6.1 years ago by Davide Chicco ▴ 120
0
votes
0
replies
2.6k
views
Comment: C: bcftools / samtools, which database does the MAF function use?
6.2 years ago by Davide Chicco ▴ 120
0
votes
2
replies
2.6k
views
bcftools / samtools, which database does the MAF function use?
bcftools samtools MAF
updated 6.2 years ago by 166k • written 6.2 years ago by ▴ 120
0
votes
1
reply
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
0
votes
1
reply
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
3
votes
2
replies
2.4k
views
bash, how can I distinguish synonymous from non-synonymous variants in VCF files?
R vcf variant
updated 6.3 years ago by 4.1k • written 6.3 years ago by ▴ 120
0
votes
1
reply
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
0
votes
1
reply
2.1k
views
Bioconductor, how to convert an ExpressionFeatureSet to an ExpressionSet?
bioconductor
6.3 years ago by Davide Chicco ▴ 120
1
vote
2
replies
1.1k
views
Datasets of genomic regions related to heart failure?
dataset heart
6.3 years ago by Davide Chicco ▴ 120
0
votes
3
replies
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
0
votes
1
reply
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
0
votes
1
reply
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
0
votes
1
reply
9.3k
views
Comment: C: How to check the presence of mutations of a specific gene in a specific VCF file
6.3 years ago by Davide Chicco ▴ 120
4
votes
17
replies
9.3k
views
How to check the presence of mutations of a specific gene in a specific VCF file?
vcf genes
updated 6.3 years ago by 16k • written 6.3 years ago by ▴ 120
0
votes
0
replies
4.3k
views
Comment: C: Collapsing probesets to genes on WGCNA
6.4 years ago by Davide Chicco ▴ 120
0
votes
3
replies
4.3k
views
Comment: C: Collapsing probesets to genes on WGCNA
6.4 years ago by Davide Chicco ▴ 120
0
votes
1
reply
4.3k
views
Comment: C: Collapsing probesets to genes on WGCNA
6.4 years ago by Davide Chicco ▴ 120
0
votes
1
reply
4.3k
views
Comment: C: Collapsing probesets to genes on WGCNA
6.4 years ago by Davide Chicco ▴ 120
6
votes
11
replies
4.3k
views
Collapsing probesets to genes on WGCNA
WGCNA gene-expression R
updated 14 months ago by 45k • written 6.4 years ago by ▴ 120
13
votes
7
replies
4.2k
views
How to retrieve the genes associated to a VCF file?
vcf genes R
updated 6.4 years ago by ▴ 160 • written 6.4 years ago by ▴ 120
0
votes
1
reply
4.2k
views
Comment: C: R, how to retrieve the genes associated to a VCF file?
6.4 years ago by Davide Chicco ▴ 120
2
votes
2
replies
2.5k
views
How to map Affymetrix probe ID's from a GEO dataset to corresponding gene symbols?
bioconductor r GEO
updated 6.6 years ago by 20 • written 6.6 years ago by ▴ 120
0
votes
1
reply
3.0k
views
Bioconductor getGEO(), how to convert a single eset of GSE matrix files to a list of esets?
Bioconductor getGEO R
6.6 years ago by Davide Chicco ▴ 120
1
vote
2
replies
4.5k
views
Answer: Answer: Why does BedTools Map operation produce all dots as output?
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 120
3
votes
8
replies
4.5k
views
Why does BedTools Map operation produce all dots as output?
genomics map bedtools
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 120
0
votes
1
reply
4.5k
views
Comment: Comment: Why does BedTools Map operation produce all dots as output?
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 120
0
votes
0
replies
4.5k
views
Comment: C: Why does BedTools Map operation produce all dots as output?
10.6 years ago by Davide Chicco ▴ 120
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