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3.5k
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Find conserved blocks and extract subalignment with Python
multiple-sequence-alignment
python
updated 18 months ago by
Ram
44k • written 7.6 years ago by
Kevin D
▴ 30
1
vote
1
reply
2.8k
views
Comment:
C: IUAPC codes in consensus sequence ? samtools mpileup / bcftools call / bcftools
7.7 years ago by
Kevin D
▴ 30
2
votes
3
replies
2.8k
views
IUAPC codes in consensus sequence ? samtools mpileup / bcftools call / bcftools consensus
bcftools
consensus
IUAPC
updated 7.7 years ago by
Pierre Lindenbaum
164k • written 7.7 years ago by
Kevin D
▴ 30
1
vote
0
replies
2.2k
views
What seems to work best to get consensus sequence after mapping: variant calling or de-novo assembly?
mpileup
samtools
BWA
SOAP-denovo2
updated 21 months ago by
Ram
44k • written 7.7 years ago by
Kevin D
▴ 30
0
votes
1
reply
2.8k
views
Comment:
C: Extracting pairwise alignment info
7.8 years ago by
Kevin D
▴ 30
0
votes
0
replies
2.8k
views
Comment:
C: Extracting pairwise alignment info
7.8 years ago by
Kevin D
▴ 30
0
votes
1
reply
2.8k
views
Comment:
C: Extracting pairwise alignment info
7.8 years ago by
Kevin D
▴ 30
3
votes
9
replies
2.8k
views
Extracting pairwise alignment info
pairwise alignement
grep
awk
sed
unix
updated 7.8 years ago by
5heikki
11k • written 7.8 years ago by
Kevin D
▴ 30
0
votes
1
reply
2.8k
views
Comment:
C: Extracting pairwise alignment info
7.8 years ago by
Kevin D
▴ 30
0
votes
0
replies
2.2k
views
Comment:
C: Extracting a set of complete genes from de novo assembled unannotated contigs
7.8 years ago by
Kevin D
▴ 30
0
votes
2
replies
2.2k
views
Extracting a set of complete genes from de novo assembled unannotated contigs
blast
gene extraction
complete genes
unannotated
updated 7.8 years ago by
Sentinel156
▴ 190 • written 7.8 years ago by
Kevin D
▴ 30
0
votes
0
replies
2.0k
views
Comment:
C: DNA multialignment and conservation profile
7.9 years ago by
Kevin D
▴ 30
0
votes
1
reply
2.0k
views
Comment:
C: DNA multialignment and conservation profile
7.9 years ago by
Kevin D
▴ 30
0
votes
4
replies
2.0k
views
DNA multialignment and conservation profile
alignment
genome
7.9 years ago by
Kevin D
▴ 30
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