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0
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1
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6.7k
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Comment: C: DESEQ2 results - write to TSV file
6.5 years ago by cpak1981 ▴ 140
8
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4
replies
6.7k
views
DESEQ2 results - write to TSV file
DESEQ2
6.5 years ago by cpak1981 ▴ 140
0
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0
replies
1.3k
views
Comment: C: Splitting paired-end RNA-seq data in bedgraph format according to strand
6.6 years ago by cpak1981 ▴ 140
1
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0
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9.2k
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Comment: C: Stringtie prepDE.py Error line 32
6.7 years ago by cpak1981 ▴ 140
1
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0
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2.9k
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Comment: C: HiSAT2 segfault after long run
7.0 years ago by cpak1981 ▴ 140
1
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1
reply
7.5k
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Comment: C: extracting mapped reads from the bam file
7.0 years ago by cpak1981 ▴ 140
2
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0
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7.5k
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Comment: C: extracting mapped reads from the bam file
7.0 years ago by cpak1981 ▴ 140
1
vote
1
reply
1.9k
views
drosophila reference genome - flybase >6 - explanation of files
drosophila reference genome
7.0 years ago by cpak1981 ▴ 140
0
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0
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1.4k
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BED columns used by MACS2
macs2 bed
7.1 years ago by cpak1981 ▴ 140
0
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0
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2.0k
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Comment: C: good CIGAR value but poor MAPQ value
7.1 years ago by cpak1981 ▴ 140
0
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1
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2.0k
views
Comment: C: good CIGAR value but poor MAPQ value
7.1 years ago by cpak1981 ▴ 140
3
votes
4
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2.0k
views
good CIGAR value but poor MAPQ value
bwa
updated 7.1 years ago by 47k • written 7.1 years ago by ▴ 140
19
votes
4
replies
13k
views
HISAT2 rna-strandness option
RNA-Seq HISAT2
updated 7.4 years ago by ★ 5.2k • written 7.4 years ago by ▴ 140
0
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0
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13k
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Comment: C: HISAT2 rna-strandness option
7.4 years ago by cpak1981 ▴ 140
0
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1
reply
3.5k
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Comment: C: Finding Plasmid Contruct Insertion in Genome through Split Alignment
7.4 years ago by cpak1981 ▴ 140
0
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1
reply
3.4k
views
stringtie (.gtf) vs ballgown (t_data.ctab) FPKM values do not match - why?
RNA-seq stringtie ballgown FPKM
7.4 years ago by cpak1981 ▴ 140
2
votes
9
replies
4.1k
views
convert2bed issue with large input file?
convert2bed bedops bam2bed
7.6 years ago by cpak1981 ▴ 140
0
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2
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4.1k
views
Comment: A: convert2bed issue with large input file?
7.6 years ago by cpak1981 ▴ 140
0
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1
reply
4.1k
views
Comment: C: convert2bed issue with large input file?
7.6 years ago by cpak1981 ▴ 140
0
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0
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4.1k
views
Comment: C: convert2bed issue with large input file?
7.6 years ago by cpak1981 ▴ 140
0
votes
0
replies
4.1k
views
Comment: C: convert2bed issue with large input file?
7.6 years ago by cpak1981 ▴ 140
6
votes
1
reply
5.7k
views
Deeptools plotHeatmap - Maintain Order of Input BED file
deeptools plotheatmap
updated 7.6 years ago by 104k • written 7.6 years ago by ▴ 140
3
votes
6
replies
2.1k
views
Difference in signal-to-noise in MNase-Seq at 100 vs 200 vs 400 million reads
signal-to-noise MNase numbers of reads
updated 7.7 years ago by 8.9k • written 7.8 years ago by ▴ 140
1
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0
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2.1k
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Answer: A: Difference in signal-to-noise in MNase-Seq at 100 vs 200 vs 400 million reads
7.7 years ago by cpak1981 ▴ 140
0
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2
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2.1k
views
Comment: A: Difference in signal-to-noise in MNase-Seq at 100 vs 200 vs 400 million reads
7.7 years ago by cpak1981 ▴ 140
0
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0
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3.6k
views
Comment: A: Distinguish BAM vs BAMPE format
7.7 years ago by cpak1981 ▴ 140
1
vote
2
replies
3.6k
views
Distinguish BAM vs BAMPE format
BAM BAMPE BWA
7.7 years ago by cpak1981 ▴ 140
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