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0
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4
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2.0k
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Installation error with funannotate?
RNA-Seq software error alignment next-gen
7.5 years ago by PK ▴ 130
0
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1
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2.5k
views
Comment: C: How to preform genome annotation?
7.5 years ago by PK ▴ 130
5
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8
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2.5k
views
How to preform genome annotation?
next-gen alignment genome
updated 7.5 years ago by ★ 1.5k • written 7.5 years ago by ▴ 130
0
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1
reply
3.3k
views
Comment: C: Genome assembly contig ordering
7.5 years ago by PK ▴ 130
0
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1
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2.5k
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Comment: C: How to preform genome annotation?
7.5 years ago by PK ▴ 130
0
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0
replies
1.7k
views
How to specify frag len mean and frag len std dev while running cufflinks?
RNA-Seq software error next-gen
updated 7.7 years ago by 20 • written 7.8 years ago by ▴ 130
1
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1
reply
1.0k
views
What is difference between default mode and with parameter mode in HTSeq?
RNA-Seq htseq ngs
7.7 years ago by PK ▴ 130
0
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0
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3.4k
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Comment: C: How to identify adapters in FASTQ file?
7.7 years ago by PK ▴ 130
4
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8
replies
3.4k
views
How to identify adapters in FASTQ file?
RNA-Seq fastqc ngs
updated 7.7 years ago by 47k • written 7.7 years ago by ▴ 130
0
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0
replies
972
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Comment: C: Data replicating error?
7.7 years ago by PK ▴ 130
0
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1
reply
972
views
Comment: C: Data replicating error?
7.7 years ago by PK ▴ 130
0
votes
4
replies
972
views
Data replicating error?
RNA-Seq ngs software error
7.7 years ago by PK ▴ 130
0
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0
replies
3.4k
views
Comment: C: How to identify adapters in FASTQ file?
7.7 years ago by PK ▴ 130
0
votes
1
reply
3.4k
views
Comment: C: How to identify adapters in FASTQ file?
7.7 years ago by PK ▴ 130
0
votes
1
reply
3.4k
views
Comment: C: How to identify adapters in FASTQ file?
7.7 years ago by PK ▴ 130
0
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0
replies
2.1k
views
Comment: C: DESeq error of my data?
7.7 years ago by PK ▴ 130
11
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9
replies
12k
views
How calculate RPKM values for DESeq?
R RNA-Seq software error
updated 7.7 years ago by ★ 2.0k • written 7.7 years ago by ▴ 130
6
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5
replies
2.1k
views
DESeq error of my data?
R RNA-Seq software error
7.7 years ago by PK ▴ 130
0
votes
1
reply
12k
views
Comment: C: How calculate RPKM values for DESeq?
7.7 years ago by PK ▴ 130
0
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0
replies
12k
views
Comment: C: How calculate RPKM values for DESeq?
7.7 years ago by PK ▴ 130
0
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1
reply
12k
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Comment: C: Please provide a relevant title for this question - [MOD]
7.7 years ago by PK ▴ 130
0
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1
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2.7k
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Comment: C: I got error when i run DESeq None of your conditions is replicated. Use method=
7.7 years ago by PK ▴ 130
6
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4
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2.7k
views
I got error when i run DESeq None of your conditions is replicated. Use method='blind' to estimate across conditions, or 'pooled-CR', if you have cr…
R RNA-Seq software error
updated 7.7 years ago by ★ 2.0k • written 7.7 years ago by ▴ 130
0
votes
0
replies
1.3k
views
Which parameters to change in Tophat default settings for homosapiens cancer data?
RNA-Seq next-gen software error
7.7 years ago by PK ▴ 130
2
votes
2
replies
2.4k
views
Error: duplicate GFF ID 'ENST00000400518' encountered! [FAILED] Error: could not execute cuffcompare
RNA-Seq next-gen software error
updated 7.7 years ago by 20k • written 7.7 years ago by ▴ 130
1
vote
2
replies
1.6k
views
how to use -u/--multi-read-correct and -b/--frag-bias-correct in my command?
software error RNA-Seq ngs
7.8 years ago by PK ▴ 130
6
votes
3
replies
2.8k
views
How to differentiate SNPs Vs Sequencing error in RNA Seq?
RNA-Seq next-gen SNP
updated 7.8 years ago by 7.3k • written 7.8 years ago by ▴ 130
0
votes
0
replies
2.0k
views
Comment: C: I want to know about the actual function of Bowtie?
7.8 years ago by PK ▴ 130
0
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0
replies
1.6k
views
Comment: C: how to use -u/--multi-read-correct and -b/--frag-bias-correct ?
7.8 years ago by PK ▴ 130
0
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1
reply
2.0k
views
Comment: C: I want to know about the actual function of Bowtie?
7.8 years ago by PK ▴ 130
0
votes
1
reply
2.0k
views
Comment: C: I want to know about the actual function of Bowtie?
updated 7.8 years ago by 147k • written 7.8 years ago by ▴ 130
5
votes
7
replies
2.0k
views
I want to know about the actual function of Bowtie?
bowtie2
updated 7.8 years ago by 20k • written 7.8 years ago by ▴ 130
0
votes
0
replies
1.9k
views
Comment: C: RNA-Seq tophat command error?
7.8 years ago by PK ▴ 130
0
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1
reply
1.6k
views
Comment: C: Any possible to run cuffdiff without cuffqunt?
7.8 years ago by PK ▴ 130
0
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1
reply
1.9k
views
Comment: C: RNA-Seq tophat command error?
7.8 years ago by PK ▴ 130
7
votes
7
replies
1.9k
views
RNA-Seq tophat command error?
RNA-Seq software error next-gen
updated 7.8 years ago by 12k • written 7.8 years ago by ▴ 130
0
votes
0
replies
1.9k
views
Comment: C: RNA-Seq tophat comment error?
7.8 years ago by PK ▴ 130
0
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0
replies
1.7k
views
Comment: C: Coverage-search algorithm is turned on, making this step very slow
7.8 years ago by PK ▴ 130
1
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2
replies
1.7k
views
Coverage-search algorithm is turned on, making this step very slow
rna-seq software error alignment
updated 7.8 years ago by 104k • written 7.8 years ago by ▴ 130
0
votes
0
replies
4.6k
views
Comment: C: Warning: Could not find FASTA file /home/praveenkumarr/rice_default/bwt/genome/g
7.8 years ago by PK ▴ 130
0
votes
1
reply
4.6k
views
Comment: C: Warning: Could not find FASTA file /home/praveenkumarr/rice_default/bwt/genome/g
7.8 years ago by PK ▴ 130
0
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0
replies
4.9k
views
Comment: C: where i can download reference MSU7 rice genome?
7.8 years ago by PK ▴ 130
0
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1
reply
4.6k
views
Comment: C: Warning: Could not find FASTA file /home/praveenkumarr/rice_default/bwt/genome/g
7.8 years ago by PK ▴ 130
2
votes
8
replies
4.6k
views
Warning: Could not find FASTA file /home/praveenkumarr/rice_default/bwt/genome/genome.fa
RNA-Seq next-gen software error
updated 7.8 years ago by 12k • written 7.8 years ago by ▴ 130
0
votes
1
reply
4.9k
views
Comment: C: where i can download reference MSU7 rice genome?
7.8 years ago by PK ▴ 130
0
votes
1
reply
4.9k
views
Comment: C: where i can download reference MSU7 rice genome?
updated 7.8 years ago by 147k • written 7.8 years ago by ▴ 130
6
votes
7
replies
4.9k
views
where i can download reference MSU7 rice genome?
RNA-Seq next-gen
updated 7.8 years ago by 147k • written 7.8 years ago by ▴ 130
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